[HTML][HTML] The diploid genome sequence of an individual human
Presented here is a genome sequence of an individual human. It was produced from∼ 32
million random DNA fragments, sequenced by Sanger dideoxy technology and assembled …
million random DNA fragments, sequenced by Sanger dideoxy technology and assembled …
Sequencing of isolated sperm cells for direct haplotyping of a human genome
EF Kirkness, RV Grindberg, J Yee-Greenbaum… - Genome …, 2013 - genome.cshlp.org
There is increasing evidence that the phenotypic effects of genomic sequence variants are
best understood in terms of variant haplotypes rather than as isolated polymorphisms …
best understood in terms of variant haplotypes rather than as isolated polymorphisms …
Direct determination of diploid genome sequences
Determining the genome sequence of an organism is challenging, yet fundamental to
understanding its biology. Over the past decade, thousands of human genomes have been …
understanding its biology. Over the past decade, thousands of human genomes have been …
[HTML][HTML] The diploid genome sequence of an Asian individual
Here we present the first diploid genome sequence of an Asian individual. The genome was
sequenced to 36-fold average coverage using massively parallel sequencing technology …
sequenced to 36-fold average coverage using massively parallel sequencing technology …
[HTML][HTML] Modernizing reference genome assemblies
DM Church, VA Schneider, T Graves, K Auger… - PLoS …, 2011 - journals.plos.org
The availability of a high quality human genome assembly has revolutionized biomedical
research. Genomics has now entered the realm of clinical genetics, with many groups using …
research. Genomics has now entered the realm of clinical genetics, with many groups using …
De novo assembly of a haplotype-resolved human genome
The human genome is diploid, and knowledge of the variants on each chromosome is
important for the interpretation of genomic information. Here we report the assembly of a …
important for the interpretation of genomic information. Here we report the assembly of a …
Assembly and diploid architecture of an individual human genome via single-molecule technologies
M Pendleton, R Sebra, AWC Pang, A Ummat… - Nature …, 2015 - nature.com
We present the first comprehensive analysis of a diploid human genome that combines
single-molecule sequencing with single-molecule genome maps. Our hybrid assembly …
single-molecule sequencing with single-molecule genome maps. Our hybrid assembly …
Discovery and genotyping of structural variation from long-read haploid genome sequence data
In an effort to more fully understand the full spectrum of human genetic variation, we
generated deep single-molecule, real-time (SMRT) sequencing data from two haploid …
generated deep single-molecule, real-time (SMRT) sequencing data from two haploid …
Personal genome sequencing: current approaches and challenges
M Snyder, J Du, M Gerstein - Genes & development, 2010 - genesdev.cshlp.org
The revolution in DNA sequencing technologies has now made it feasible to determine the
genome sequences of many individuals; ie,“personal genomes.” Genome sequences of …
genome sequences of many individuals; ie,“personal genomes.” Genome sequences of …
[HTML][HTML] Dense and accurate whole-chromosome haplotyping of individual genomes
The diploid nature of the human genome is neglected in many analyses done today, where
a genome is perceived as a set of unphased variants with respect to a reference genome …
a genome is perceived as a set of unphased variants with respect to a reference genome …