Whole-genome genotyping on bead arrays

KL Gunderson - DNA Microarrays for Biomedical Research: Methods …, 2009 - Springer
In this review, we describe the laboratory implementation of Infinium® whole genome
genotyping (WGG) technology for whole genome association studies and copy number …

Whole‐genome genotyping

KL Gunderson, FJ Steemers, H Ren, P Ng, L Zhou… - Methods in …, 2006 - Elsevier
We have developed an array‐based whole‐genome genotyping (WGG) assay (Infinium)
using our BeadChip platform that effectively enables unlimited multiplexing and …

Whole genome genotyping technologies on the BeadArray™ platform

FJ Steemers, KL Gunderson - … Journal: Healthcare Nutrition …, 2007 - Wiley Online Library
The ability to simultaneously genotype hundreds of thousands of single‐nucleotide
polymorphisms (SNPs) in a single assay has recently become feasible due to innovative …

Infinium assay for large-scale SNP genotyping applications

AJ Adler, GB Wiley, PM Gaffney - JoVE (Journal of Visualized Experiments), 2013 - jove.com
Genotyping variants in the human genome has proven to be an efficient method to identify
genetic associations with phenotypes. The distribution of variants within families or …

BeadArray-based genotyping

H Butler, J Ragoussis - Genomics Protocols, 2008 - Springer
There is a demand for technologies that allow the interrogation of large numbers of SNP
polymorphisms, both in whole-genome panels and in smaller custom designed sets, to …

A genome-wide scalable SNP genotyping assay using microarray technology

KL Gunderson, FJ Steemers, G Lee, LG Mendoza… - Nature …, 2005 - nature.com
Oligonucleotide probe arrays have enabled massively parallel analysis of gene expression
levels from a single cDNA sample. Application of microarray technology to analyzing …

R/Bioconductor software for Illumina's Infinium whole-genome genotyping BeadChips

ME Ritchie, BS Carvalho, KN Hetrick, S Tavaré… - …, 2009 - academic.oup.com
Illumina produces a number of microarray-based technologies for human genotyping. An
Infinium BeadChip is a two-color platform that types between 105 and 106 single nucleotide …

[3] illumina universal bead arrays

JB Fan, KL Gunderson, M Bibikova, JM Yeakley… - Methods in …, 2006 - Elsevier
This chapter describes an accurate, scalable, and flexible microarray technology. It includes
a miniaturized array platform where each individual feature is quality controlled and a …

Successful use of whole genome amplified DNA from multiple source types for high-density Illumina SNP microarrays

CL Dagnall, LM Morton, BD Hicks, S Li, W Zhou… - BMC genomics, 2018 - Springer
Background The recommended genomic DNA input requirements for whole genome single
nucleotide polymorphism microarrays can limit the scope of molecular epidemiological …

An overview of custom array sequencing

P Kothiyal, S Cox, J Ebert, BJ Aronow… - Current protocols in …, 2009 - Wiley Online Library
This unit provides an overview of oligo hybridization–based resequencing and a wide range
of considerations for implementing the technology and analyzing the resulting data. The …