Bayesian total-evidence dating reveals the recent crown radiation of penguins

A Gavryushkina, TA Heath, DT Ksepka… - Systematic …, 2017 - academic.oup.com
The total-evidence approach to divergence time dating uses molecular and morphological
data from extant and fossil species to infer phylogenetic relationships, species divergence …

Total-evidence dating under the fossilized birth–death process

C Zhang, T Stadler, S Klopfstein, TA Heath… - Systematic …, 2016 - academic.oup.com
Bayesian total-evidence dating involves the simultaneous analysis of morphological data
from the fossil record and morphological and sequence data from recent organisms, and it …

Morphological clocks in paleontology, and a mid-Cretaceous origin of crown Aves

MSY Lee, A Cau, D Naish, GJ Dyke - Systematic Biology, 2014 - academic.oup.com
Birds are among the most diverse and intensively studied vertebrate groups, but many
aspects of their higher-level phylogeny and evolution still remain controversial. One …

Ignoring stratigraphic age uncertainty leads to erroneous estimates of species divergence times under the fossilized birth–death process

J Barido-Sottani… - … of the Royal …, 2019 - royalsocietypublishing.org
Fossil information is essential for estimating species divergence times, and can be
integrated into Bayesian phylogenetic inference using the fossilized birth–death (FBD) …

The fossilized birth–death process for coherent calibration of divergence-time estimates

TA Heath, JP Huelsenbeck… - Proceedings of the …, 2014 - National Acad Sciences
Time-calibrated species phylogenies are critical for addressing a wide range of questions in
evolutionary biology, such as those that elucidate historical biogeography or uncover …

King penguin demography since the last glaciation inferred from genome-wide data

E Trucchi, P Gratton, JD Whittington… - … of the Royal …, 2014 - royalsocietypublishing.org
How natural climate cycles, such as past glacial/interglacial patterns, have shaped species
distributions at the high-latitude regions of the Southern Hemisphere is still largely unclear …

[HTML][HTML] Bayesian molecular clock dating using genome-scale datasets

M Dos Reis, Z Yang - Evolutionary genomics: Statistical and …, 2019 - Springer
Bayesian methods for molecular clock dating of species divergences have been greatly
developed during the past decade. Advantages of the methods include the use of relaxed …

Bayesian phylogenetic estimation of clade ages supports trans-Atlantic dispersal of cichlid fishes

M Matschiner, Z Musilová, JMI Barth… - Systematic …, 2017 - academic.oup.com
Divergence-time estimation based on molecular phylogenies and the fossil record has
provided insights into fundamental questions of evolutionary biology. In Bayesian node …

The impact of the representation of fossil calibrations on Bayesian estimation of species divergence times

J Inoue, PCJ Donoghue, Z Yang - Systematic biology, 2010 - academic.oup.com
Bayesian inference provides a powerful framework for integrating different sources of
information (in particular, molecules and fossils) to derive estimates of species divergence …

Bayesian molecular dating: opening up the black box

L Bromham, S Duchêne, X Hua, AM Ritchie… - Biological …, 2018 - Wiley Online Library
Molecular dating analyses allow evolutionary timescales to be estimated from genetic data,
offering an unprecedented capacity for investigating the evolutionary past of all species …