[HTML][HTML] Epromoters function as a hub to recruit key transcription factors required for the inflammatory response
D Santiago-Algarra, C Souaid, H Singh… - Nature …, 2021 - nature.com
Gene expression is controlled by the involvement of gene-proximal (promoters) and distal
(enhancers) regulatory elements. Our previous results demonstrated that a subset of gene …
(enhancers) regulatory elements. Our previous results demonstrated that a subset of gene …
[HTML][HTML] Identification and characterization of enhancers controlling the inflammatory gene expression program in macrophages
Enhancers determine tissue-specific gene expression programs. Enhancers are marked by
high histone H3 lysine 4 mono-methylation (H3K4me1) and by the acetyl-transferase p300 …
high histone H3 lysine 4 mono-methylation (H3K4me1) and by the acetyl-transferase p300 …
[HTML][HTML] Genome-wide profiling of transcribed enhancers during macrophage activation
Background Macrophages are sentinel cells essential for tissue homeostasis and host
defence. Owing to their plasticity, macrophages acquire a range of functional phenotypes in …
defence. Owing to their plasticity, macrophages acquire a range of functional phenotypes in …
[HTML][HTML] Preparing the first responders: building the inflammatory transcriptome from the ground up
I Rogatsky, K Adelman - Molecular cell, 2014 - cell.com
In cells of the immune system, inflammatory stimuli trigger highly coordinated cascades of
gene activation that are precisely calibrated to the nature and strength of the stimulus …
gene activation that are precisely calibrated to the nature and strength of the stimulus …
The specificity of innate immune responses is enforced by repression of interferon response elements by NF-κB p50
CS Cheng, KE Feldman, J Lee, S Verma, DB Huang… - Science …, 2011 - science.org
The specific binding of transcription factors to cognate sequence elements is thought to be
critical for the generation of specific gene expression programs. Members of the nuclear …
critical for the generation of specific gene expression programs. Members of the nuclear …
Complexity in transcription control at the activation domain–Mediator interface
MA Balamotis, MA Pennella, JL Stevens, B Wasylyk… - Science …, 2009 - science.org
Transcript elongation by polymerase II paused at the Egr1 promoter is activated by mitogen-
activated protein kinase phosphorylation of the ternary complex factor (TCF) ELK1 bound at …
activated protein kinase phosphorylation of the ternary complex factor (TCF) ELK1 bound at …
[HTML][HTML] Remodeling of the enhancer landscape during macrophage activation is coupled to enhancer transcription
Recent studies suggest a hierarchical model in which lineage-determining factors act in a
collaborative manner to select and prime cell-specific enhancers, thereby enabling signal …
collaborative manner to select and prime cell-specific enhancers, thereby enabling signal …
[HTML][HTML] Gene-specific mechanisms direct glucocorticoid-receptor-driven repression of inflammatory response genes in macrophages
MA Sacta, B Tharmalingam, M Coppo, DA Rollins… - Elife, 2018 - elifesciences.org
The glucocorticoid receptor (GR) potently represses macrophage-elicited inflammation,
however, the underlying mechanisms remain obscure. Our genome-wide analysis in mouse …
however, the underlying mechanisms remain obscure. Our genome-wide analysis in mouse …
When Ets transcription factors meet their partners
A Verger, M Duterque‐Coquillaud - Bioessays, 2002 - Wiley Online Library
Ets proteins are a family of transcription factors that regulate the expression of a myriad of
genes in a variety of tissues and cell types. This functional versatility emerges from their …
genes in a variety of tissues and cell types. This functional versatility emerges from their …
[HTML][HTML] Comparative analysis of immune cells reveals a conserved regulatory lexicon
Most well-characterized enhancers are deeply conserved. In contrast, genome-wide
comparative studies of steady-state systems showed that only a small fraction of active …
comparative studies of steady-state systems showed that only a small fraction of active …