[HTML][HTML] Epromoters function as a hub to recruit key transcription factors required for the inflammatory response

D Santiago-Algarra, C Souaid, H Singh… - Nature …, 2021 - nature.com
Gene expression is controlled by the involvement of gene-proximal (promoters) and distal
(enhancers) regulatory elements. Our previous results demonstrated that a subset of gene …

[HTML][HTML] Identification and characterization of enhancers controlling the inflammatory gene expression program in macrophages

S Ghisletti, I Barozzi, F Mietton, S Polletti, F De Santa… - Immunity, 2010 - cell.com
Enhancers determine tissue-specific gene expression programs. Enhancers are marked by
high histone H3 lysine 4 mono-methylation (H3K4me1) and by the acetyl-transferase p300 …

[HTML][HTML] Genome-wide profiling of transcribed enhancers during macrophage activation

E Denisenko, R Guler, MM Mhlanga, H Suzuki… - Epigenetics & …, 2017 - Springer
Background Macrophages are sentinel cells essential for tissue homeostasis and host
defence. Owing to their plasticity, macrophages acquire a range of functional phenotypes in …

[HTML][HTML] Preparing the first responders: building the inflammatory transcriptome from the ground up

I Rogatsky, K Adelman - Molecular cell, 2014 - cell.com
In cells of the immune system, inflammatory stimuli trigger highly coordinated cascades of
gene activation that are precisely calibrated to the nature and strength of the stimulus …

The specificity of innate immune responses is enforced by repression of interferon response elements by NF-κB p50

CS Cheng, KE Feldman, J Lee, S Verma, DB Huang… - Science …, 2011 - science.org
The specific binding of transcription factors to cognate sequence elements is thought to be
critical for the generation of specific gene expression programs. Members of the nuclear …

Complexity in transcription control at the activation domain–Mediator interface

MA Balamotis, MA Pennella, JL Stevens, B Wasylyk… - Science …, 2009 - science.org
Transcript elongation by polymerase II paused at the Egr1 promoter is activated by mitogen-
activated protein kinase phosphorylation of the ternary complex factor (TCF) ELK1 bound at …

[HTML][HTML] Remodeling of the enhancer landscape during macrophage activation is coupled to enhancer transcription

MU Kaikkonen, NJ Spann, S Heinz, CE Romanoski… - Molecular cell, 2013 - cell.com
Recent studies suggest a hierarchical model in which lineage-determining factors act in a
collaborative manner to select and prime cell-specific enhancers, thereby enabling signal …

[HTML][HTML] Gene-specific mechanisms direct glucocorticoid-receptor-driven repression of inflammatory response genes in macrophages

MA Sacta, B Tharmalingam, M Coppo, DA Rollins… - Elife, 2018 - elifesciences.org
The glucocorticoid receptor (GR) potently represses macrophage-elicited inflammation,
however, the underlying mechanisms remain obscure. Our genome-wide analysis in mouse …

When Ets transcription factors meet their partners

A Verger, M Duterque‐Coquillaud - Bioessays, 2002 - Wiley Online Library
Ets proteins are a family of transcription factors that regulate the expression of a myriad of
genes in a variety of tissues and cell types. This functional versatility emerges from their …

[HTML][HTML] Comparative analysis of immune cells reveals a conserved regulatory lexicon

E Donnard, P Vangala, S Afik, S McCauley… - Cell systems, 2018 - cell.com
Most well-characterized enhancers are deeply conserved. In contrast, genome-wide
comparative studies of steady-state systems showed that only a small fraction of active …