Bayesian hierarchical structured variable selection methods with application to molecular inversion probe studies in breast cancer

L Zhang, V Baladandayuthapani… - Journal of the Royal …, 2014 - academic.oup.com
The analysis of genomics alterations that may occur in nature when segments of
chromosomes are copied (known as copy number alterations) has been a focus of research …

[PDF][PDF] Bayesian models for variable selection that incorporate biological information

M Vannucci, FC Stingo, C Berzuini - Bayesian Statistics, 2010 - researchgate.net
Variable selection has been the focus of much research in recent years. Bayesian methods
have found many successful applications, particularly in situations where the amount of …

Incorporating grouping information in Bayesian variable selection with applications in genomics

V Rockova, E Lesaffre - 2014 - projecteuclid.org
In many applications it is of interest to determine a limited number of important explanatory
factors (representing groups of potentially overlapping predictors) rather than original …

Bayesian data selection

EN Weinstein, JW Miller - Journal of Machine Learning Research, 2023 - jmlr.org
Insights into complex, high-dimensional data can be obtained by discovering features of the
data that match or do not match a model of interest. To formalize this task, we introduce the" …

An efficient stochastic search for Bayesian variable selection with high-dimensional correlated predictors

D Kwon, MT Landi, M Vannucci, HJ Issaq… - … statistics & data analysis, 2011 - Elsevier
We present a Bayesian variable selection method for the setting in which the number of
independent variables or predictors in a particular dataset is much larger than the available …

Gene selection using a two-level hierarchical Bayesian model

K Bae, BK Mallick - Bioinformatics, 2004 - academic.oup.com
The fundamental problem of gene selection via cDNA data is to identify which genes are
differentially expressed across different kinds of tissue samples (eg normal and cancer) …

Bayesian model selection for high-dimensional data

NN Narisetty - Handbook of statistics, 2020 - Elsevier
High-dimensional data, where the number of features or covariates can even be larger than
the number of independent samples, are ubiquitous and are encountered on a regular basis …

Scalable bayesian variable selection for structured high-dimensional data

C Chang, S Kundu, Q Long - Biometrics, 2018 - academic.oup.com
Variable selection for structured covariates lying on an underlying known graph is a problem
motivated by practical applications, and has been a topic of increasing interest. However …

Bayesian variable selection in structured high-dimensional covariate spaces with applications in genomics

F Li, NR Zhang - Journal of the American statistical association, 2010 - Taylor & Francis
We consider the problem of variable selection in regression modeling in high-dimensional
spaces where there is known structure among the covariates. This is an unconventional …

Gene selection: a Bayesian variable selection approach

KE Lee, N Sha, ER Dougherty, M Vannucci… - …, 2003 - academic.oup.com
Selection of significant genes via expression patterns is an important problem in microarray
experiments. Owing to small sample size and the large number of variables (genes), the …