Polyploid speciation and genome evolution: lessons from recent allopolyploids

ML Ainouche, JF Wendel - … evolution, speciation, coevolution and origin of …, 2014 - Springer
Whole genome duplication (polyploidy) represents a primary mechanism of sympatric
speciation, especially in plants where it is particularly prevalent. In this chapter, we focus on …

[HTML][HTML] Genomic expression dominance in allopolyploids

RA Rapp, JA Udall, JF Wendel - BMC biology, 2009 - Springer
Background Allopolyploid speciation requires rapid evolutionary reconciliation of two
diverged genomes and gene regulatory networks. Here we describe global patterns of gene …

The Early Stages of Polyploidy: Rapid and Repeated Evolution in Tragopogon

DE Soltis, RJA Buggs, WB Barbazuk… - Polyploidy and genome …, 2012 - Springer
Elucidating the causes and consequences of polyploidy (whole-genome duplication; WGD)
is arguably central to understanding the evolution of most eukaryotic lineages. However …

Extensive and Biased Intergenomic Nonreciprocal DNA Exchanges Shaped a Nascent Polyploid Genome, Gossypium (Cotton)

H Guo, X Wang, H Gundlach, KFX Mayer… - Genetics, 2014 - academic.oup.com
Genome duplication is thought to be central to the evolution of morphological complexity,
and some polyploids enjoy a variety of capabilities that transgress those of their diploid …

Jeans, genes, and genomes: cotton as a model for studying polyploidy

JF Wendel, LE Flagel, KL Adams - Polyploidy and genome evolution, 2012 - Springer
We present an overview of the cotton genus (Gossypium) as a model for the study of
polyploidy. A synopsis of the origin and evolution of polyploid cotton is provided, offering an …

Polyploid formation in cotton is not accompanied by rapid genomic changes

B Liu, CL Brubaker, G Mergeai, RC Cronn… - Genome, 2001 - cdnsciencepub.com
Recent work has demonstrated that allopolyploid speciation in plants may be associated
with non-Mendelian genomic changes in the early generations following polyploid …

[HTML][HTML] Polyploidy before and after domestication of crop species

T Akagi, K Jung, K Masuda, KK Shimizu - Current Opinion in Plant Biology, 2022 - Elsevier
Recent advances in the genomics of polyploid species answer some of the long-standing
questions about the role of polyploidy in crop species. Here, we summarize the current …

Little Evidence for Homoeologous Gene Conversion and Homoeologous Exchange Events in Gossypium Allopolyploids

JL Conover, CE Grover, J Sharbrough, D Sloan… - bioRxiv, 2023 - biorxiv.org
A complicating factor in analyzing allopolyploid genomes is the possibility of physical
interactions between homoeologous chromosomes during meiosis, resulting in either …

Duplicated genes evolve independently after polyploid formation in cotton

RC Cronn, RL Small, JF Wendel - Proceedings of the …, 1999 - National Acad Sciences
Of the many processes that generate gene duplications, polyploidy is unique in that entire
genomes are duplicated. This process has been important in the evolution of many …

[HTML][HTML] Duplicate gene expression in allopolyploid Gossypiumreveals two temporally distinct phases of expression evolution

L Flagel, J Udall, D Nettleton, J Wendel - BMC biology, 2008 - Springer
Background Polyploidy has played a prominent role in shaping the genomic architecture of
the angiosperms. Through allopolyploidization, several modern Gossypium (cotton) species …