[HTML][HTML] A pipeline of integrating transcriptome and interactome to elucidate central nodes in host-pathogens interactions

N Kumar, B Mishra, MS Mukhtar - STAR protocols, 2022 - Elsevier
Investigating the complexity of host-pathogen interactions is challenging. Here, we outline a
pipeline to identify important proteins and signaling molecules in human-viral interactomes …

A structure-informed atlas of human-virus interactions

G Lasso, SV Mayer, ER Winkelmann, T Chu, O Elliot… - Cell, 2019 - cell.com
While knowledge of protein-protein interactions (PPIs) is critical for understanding virus-host
relationships, limitations on the scalability of high-throughput methods have hampered their …

VirHostNet: a knowledge base for the management and the analysis of proteome-wide virus–host interaction networks

V Navratil, B De Chassey, L Meyniel… - Nucleic acids …, 2009 - academic.oup.com
Infectious diseases caused by viral agents kill millions of people every year. The
improvement of prevention and treatment of viral infections and their associated diseases …

Protein interactions and consensus clustering analysis uncover insights into herpesvirus virion structure and function relationships

A Hernández Durán, TM Greco, B Vollmer… - PLoS …, 2019 - journals.plos.org
Infections with human herpesviruses are ubiquitous and a public health concern worldwide.
Current treatments reduce the severity of some symptoms associated to herpetic infections …

[HTML][HTML] Comprehensive characterization of human–virus protein-protein interactions reveals disease comorbidities and potential antiviral drugs

S Li, W Zhou, D Li, T Pan, J Guo, H Zou, Z Tian… - Computational and …, 2022 - Elsevier
The protein-protein interactions (PPIs) between human and viruses play important roles in
viral infection and host immune responses. Rapid accumulation of experimentally validated …

Understanding human-virus protein-protein interactions using a human protein complex-based analysis framework

S Yang, C Fu, X Lian, X Dong, Z Zhang - MSystems, 2019 - Am Soc Microbiol
Computational analysis of human-virus protein-protein interaction (PPI) data is an effective
way toward systems understanding the molecular mechanism of viral infection. Previous …

The Domain Landscape of Virus‐Host Interactomes

LL Zheng, C Li, J Ping, Y Zhou, Y Li… - BioMed research …, 2014 - Wiley Online Library
Viral infections result in millions of deaths in the world today. A thorough analysis of virus‐
host interactomes may reveal insights into viral infection and pathogenic strategies. In this …

Conserved Central Intraviral Protein Interactome of the Herpesviridae Family

A Hernández Durán, K Grünewald, M Topf - Msystems, 2019 - Am Soc Microbiol
Protein interactions are major driving forces behind the functional phenotypes of biological
processes. As such, evolutionary footprints are reflected in system-level collections of …

Common nodes of virus–host interaction revealed through an integrated network analysis

K Bösl, A Ianevski, TT Than, PI Andersen… - Frontiers in …, 2019 - frontiersin.org
Viruses are one of the major causes of acute and chronic infectious diseases and thus a
major contributor to the global burden of disease. Several studies have shown how viruses …

Virus-host interactomics: new insights and opportunities for antiviral drug discovery

B De Chassey, L Meyniel-Schicklin, J Vonderscher… - Genome medicine, 2014 - Springer
The current therapeutic arsenal against viral infections remains limited, with often poor
efficacy and incomplete coverage, and appears inadequate to face the emergence of drug …