Subsurface clade of Geobacteraceae that predominates in a diversity of Fe(III)-reducing subsurface environments

DE Holmes, RA O'neil, HA Vrionis… - The ISME …, 2007 - academic.oup.com
There are distinct differences in the physiology of Geobacter species available in pure
culture. Therefore, to understand the ecology of Geobacter species in subsurface …

[HTML][HTML] The genome of Geobacter bemidjiensis, exemplar for the subsurface clade of Geobacter species that predominate in Fe(III)-reducing subsurface …

M Aklujkar, ND Young, D Holmes, M Chavan, C Risso… - BMC genomics, 2010 - Springer
Background Geobacter species in a phylogenetic cluster known as subsurface clade 1 are
often the predominant microorganisms in subsurface environments in which Fe (III) …

Transcriptome of Geobacter uraniireducens growing in uranium-contaminated subsurface sediments

DE Holmes, RA O'neil, MA Chavan… - The ISME …, 2009 - academic.oup.com
To learn more about the physiological state of Geobacter species living in subsurface
sediments, heat-sterilized sediments from a uranium-contaminated aquifer in Rifle …

Molecular Analysis of the In Situ Growth Rates of Subsurface Geobacter Species

DE Holmes, L Giloteaux, M Barlett… - Applied and …, 2013 - Am Soc Microbiol
Molecular tools that can provide an estimate of the in situ growth rate of Geobacter species
could improve understanding of dissimilatory metal reduction in a diversity of environments …

Development of a biomarker for Geobacter activity and strain composition; Proteogenomic analysis of the citrate synthase protein during bioremediation of U(VI)

MJ Wilkins, SJ Callister, M Miletto… - Microbial …, 2011 - Wiley Online Library
Monitoring the activity of target microorganisms during stimulated bioremediation is a key
problem for the development of effective remediation strategies. At the US Department of …

Evidence of Geobacter-associated phage in a uranium-contaminated aquifer

DE Holmes, L Giloteaux, AK Chaurasia… - The ISME …, 2015 - academic.oup.com
Geobacter species may be important agents in the bioremediation of organic and metal
contaminants in the subsurface, but as yet unknown factors limit the in situ growth of …

Proteogenomic Monitoring of Geobacter Physiology during Stimulated Uranium Bioremediation

MJ Wilkins, NC VerBerkmoes, KH Williams… - Applied and …, 2009 - Am Soc Microbiol
Implementation of uranium bioremediation requires methods for monitoring the membership
and activities of the subsurface microbial communities that are responsible for reduction of …

Enrichment of Geobacter Species in Response to Stimulation of Fe(III) Reduction in Sandy Aquifer Sediments

OL Snoeyenbos-West, KP Nevin, RT Anderson… - Microbial Ecology, 2000 - Springer
A bstract Engineered stimulation of Fe (III) has been proposed as a strategy to enhance the
immobilization of radioactive and toxic metals in metal-contaminated subsurface …

Isolation of Geobacter species from diverse sedimentary environments

JD Coates, EJ Phillips, DJ Lonergan… - Applied and …, 1996 - Am Soc Microbiol
In an attempt to better understand the microorganisms responsible for Fe (III) reduction in
sedimentary environments, Fe (III)-reducing microorganisms were enriched for and isolated …

Diversity of Geobacteraceae species inhabiting metal-polluted freshwater lake sediments ascertained by 16S rDNA analyses

DE Cummings, OL Snoeyenbos-West, DT Newby… - Microbial ecology, 2003 - Springer
The abundance, distribution, and phylogenetic diversity of members of the Fe (III)-reducing
family Geobacteraceae were studied along a gradient of metal contaminants in Lake Coeur …