Transcriptome-wide association studies associated with Crohn's disease: challenges and perspectives

K Jia, J Shen - Cell & Bioscience, 2024 - Springer
Crohn's disease (CD) is regarded as a lifelong progressive disease affecting all segments of
the intestinal tract and multiple organs. Based on genome-wide association studies (GWAS) …

A convergent study of genetic variants associated with Crohn's disease: evidence from GWAS, gene expression, methylation, eQTL and TWAS

Y Dai, G Pei, Z Zhao, P Jia - Frontiers in genetics, 2019 - frontiersin.org
Crohn's Disease (CD) is one of the predominant forms of inflammatory bowel disease (IBD).
A combination of genetic and non-genetic risk factors have been reported to contribute to the …

Integrative analysis of transcriptome‐wide association study data and messenger RNA expression profiles identified candidate genes and pathways for inflammatory …

B Cheng, X Liang, Y Wen, P Li, L Zhang… - Journal of cellular …, 2019 - Wiley Online Library
Inflammatory bowel disease (IBD) is a complex disease, resulting from abnormal immune
response to intestinal tract microbiota in genetically susceptible individuals. Crohn's disease …

Identifying Crohn's disease signal from variome analysis

Y Wang, M Miller, Y Astrakhan, BS Petersen… - Genome medicine, 2019 - Springer
Background After years of concentrated research efforts, the exact cause of Crohn's disease
(CD) remains unknown. Its accurate diagnosis, however, helps in management and …

The quest for genetic risk factors for Crohn's disease in the post-GWAS era

K Fransen, M Mitrovic, CC Van Diemen, RK Weersma - Genome medicine, 2011 - Springer
Multiple genome-wide association studies (GWASs) and two large scale meta-analyses
have been performed for Crohn's disease and have identified 71 susceptibility loci. These …

Sequencing of over 100,000 individuals identifies multiple genes and rare variants associated with Crohns disease susceptibility

A Sazonovs, CR Stevens, GR Venkataraman, K Yuan… - medRxiv, 2021 - medrxiv.org
Genome-wide association studies (GWAS) have identified hundreds of loci associated with
Crohns disease (CD), however, as with all complex diseases, deriving pathogenic …

Transcriptome-wide association study for inflammatory bowel disease reveals novel candidate susceptibility genes in specific colon subsites and tissue categories

V Díez-Obrero, F Moratalla-Navarro… - Journal of Crohn's …, 2022 - academic.oup.com
Abstract Background and Aims Genome-wide association studies [GWAS] for inflammatory
bowel disease [IBD] have identified 240 risk variants. However, the benefit of understanding …

Prioritizing Crohn's disease genes by integrating association signals with gene expression implicates monocyte subsets

K Gettler, M Giri, E Kenigsberg, J Martin, LS Chuang… - Genes & …, 2019 - nature.com
Genome-wide association studies have identified~ 170 loci associated with Crohn's disease
(CD) and defining which genes drive these association signals is a major challenge. The …

A broken network of susceptibility genes in the monocytes of Crohn's disease patients

H Liu, L Guan, X Su, L Zhao, Q Shu… - Life Science …, 2024 - life-science-alliance.org
Genome-wide association studies have identified over 200 genetic loci associated with
inflammatory bowel disease; however, the mechanism of such a large amount of …

Genome-wide meta-analysis increases to 71 the number of confirmed Crohn's disease susceptibility loci

A Franke, DPB McGovern, JC Barrett, K Wang… - Nature …, 2010 - nature.com
We undertook a meta-analysis of six Crohn's disease genome-wide association studies
(GWAS) comprising 6,333 affected individuals (cases) and 15,056 controls and followed up …