Conformational lability in the class II MHC 310 helix and adjacent extended strand dictate HLA-DM susceptibility and peptide exchange

CA Painter, MP Negroni… - Proceedings of the …, 2011 - National Acad Sciences
HLA-DM is required for efficient peptide exchange on class II MHC molecules, but its
mechanism of action is controversial. We trapped an intermediate state of class II MHC HLA …

Cutting Edge: HLA-DM–Mediated Peptide Exchange Functions Normally on MHC Class II–Peptide Complexes That Have Been Weakened by Elimination of a …

A Ferrante, J Gorski - The journal of immunology, 2010 - journals.aai.org
The mechanism by which HLA-DM (DM) promotes exchange of peptides bound to HLA-DR
(DR) is still unclear. We have shown that peptide interaction with DR1 can be considered a …

Probing the ligand-induced conformational change in HLA-DR1 by selective chemical modification and mass spectrometric mapping

GJ Carven, LJ Stern - Biochemistry, 2005 - ACS Publications
Peptide binding induces conformational changes in class II MHC proteins that have been
characterized using a variety of hydrodynamic and spectroscopic approaches, but these …

[HTML][HTML] Susceptibility to HLA-DM protein is determined by a dynamic conformation of major histocompatibility complex class II molecule bound with peptide

L Yin, P Trenh, A Guce, M Wieczorek, S Lange… - Journal of Biological …, 2014 - ASBMB
HLA-DM mediates the exchange of peptides loaded onto MHCII molecules during antigen
presentation by a mechanism that remains unclear and controversial. Here, we investigated …

[HTML][HTML] The class II MHC protein HLA-DR1 in complex with an endogenous peptide: implications for the structural basis of the specificity of peptide binding

VL Murthy, LJ Stern - Structure, 1997 - cell.com
Background: Class II major histocompatibility complex (MHC) proteins are cell surface
glycoproteins that bind peptides and present them to T cells as part of the mechanism for …

Enhanced catalytic action of HLA-DM on the exchange of peptides lacking backbone hydrogen bonds between their N-terminal region and the MHC class II α-chain

E Stratikos, DC Wiley, LJ Stern - The Journal of Immunology, 2004 - journals.aai.org
The class II MHC homolog HLA-DM catalyzes exchange of peptides bound to class II MHC
proteins, and is an important component of the Ag presentation machinery. The mechanism …

The kinetic basis of peptide exchange catalysis by HLA-DM

JA Zarutskie, R Busch, Z Zavala-Ruiz… - Proceedings of the …, 2001 - National Acad Sciences
The mechanism by which the peptide exchange factor HLA-DM catalyzes peptide loading
onto structurally homologous class II MHC proteins is an outstanding problem in antigen …

Individual hydrogen bonds play a critical role in MHC class II: peptide interactions: implications for the dynamic aspects of class II trafficking and DM‐mediated peptide …

AJ Sant, C Beeson, B McFarland, J Cao… - Immunological …, 1999 - Wiley Online Library
Determination of the crystal structure of class II: peptide complexes has shown that in
addition to pocket interactions involving the side chains of the peptide, peptide binding to …

[HTML][HTML] The thermodynamic mechanism of peptide–MHC class II complex formation is a determinant of susceptibility to HLA-DM

A Ferrante, M Templeton, M Hoffman… - The Journal of …, 2015 - journals.aai.org
Peptides bind MHC class II molecules through a thermodynamically nonadditive process
consequent to the flexibility of the reactants. Currently, how the specific outcome of this …

Cutting edge: HLA-DM functions through a mechanism that does not require specific conserved hydrogen bonds in class II MHC-peptide complexes

Z Zhou, KA Callaway, DA Weber… - The Journal of …, 2009 - journals.aai.org
HLA-DM catalyzes peptide dissociation and exchange in class II MHC molecules through a
mechanism that has been proposed to involve the disruption of specific components of the …