Deploying QTL-seq for rapid delineation of a potential candidate gene underlying major trait-associated QTL in chickpea

S Das, HD Upadhyaya, D Bajaj, A Kujur… - DNA …, 2015 - academic.oup.com
A rapid high-resolution genome-wide strategy for molecular mapping of major QTL (s)/gene
(s) regulating important agronomic traits is vital for in-depth dissection of complex …

[HTML][HTML] Ultra-high density intra-specific genetic linkage maps accelerate identification of functionally relevant molecular tags governing important agronomic traits in …

A Kujur, HD Upadhyaya, T Shree, D Bajaj, S Das… - Scientific Reports, 2015 - nature.com
We discovered 26785 and 16573 high-quality SNPs differentiating two parental genotypes
of a RIL mapping population using reference desi and kabuli genome-based GBS assay. Of …

mQTL-seq delineates functionally relevant candidate gene harbouring a major QTL regulating pod number in chickpea

S Das, M Singh, R Srivastava, D Bajaj… - DNA …, 2016 - academic.oup.com
The present study used a whole-genome, NGS resequencing-based mQTL-seq (multiple
QTL-seq) strategy in two inter-specific mapping populations (Pusa 1103× ILWC 46 and Pusa …

[HTML][HTML] A combinatorial approach of comprehensive QTL-based comparative genome mapping and transcript profiling identified a seed weight-regulating candidate …

D Bajaj, HD Upadhyaya, Y Khan, S Das, S Badoni… - Scientific reports, 2015 - nature.com
High experimental validation/genotyping success rate (94–96%) and intra-specific
polymorphic potential (82–96%) of 1536 SNP and 472 SSR markers showing in silico …

[HTML][HTML] Identification of candidate genes and natural allelic variants for QTLs governing plant height in chickpea

A Kujur, HD Upadhyaya, D Bajaj, CLL Gowda… - Scientific reports, 2016 - nature.com
In the present study, molecular mapping of high-resolution plant height QTLs was performed
by integrating 3625 desi genome-derived GBS (genotyping-by-sequencing)-SNPs on an …

[HTML][HTML] High-density linkage map construction and mapping of seed trait QTLs in chickpea (Cicer arietinum L.) using Genotyping-by-Sequencing (GBS)

S Verma, S Gupta, N Bandhiwal, T Kumar… - Scientific reports, 2015 - nature.com
This study reports the use of Genotyping-by-Sequencing (GBS) for large-scale SNP
discovery and simultaneous genotyping of recombinant inbred lines (RILs) of an intra …

An integrated genomic approach for rapid delineation of candidate genes regulating agro-morphological traits in chickpea

MS Saxena, D Bajaj, S Das, A Kujur, V Kumar… - DNA …, 2014 - academic.oup.com
The identification and fine mapping of robust quantitative trait loci (QTLs)/genes governing
important agro-morphological traits in chickpea still lacks systematic efforts at a genome …

[HTML][HTML] Mapping of QTLs governing agronomic and yield traits in chickpea

SJM Gowda, P Radhika, LB Mhase… - Journal of applied …, 2011 - Springer
Chickpea is one of the most important leguminous cool season food crops, cultivated
prevalently in South Asia and Middle East. The main objective of this study was to identify …

[HTML][HTML] A genome-wide SNP scan accelerates trait-regulatory genomic loci identification in chickpea

A Kujur, D Bajaj, HD Upadhyaya, S Das, R Ranjan… - Scientific reports, 2015 - nature.com
We identified 44844 high-quality SNPs by sequencing 92 diverse chickpea accessions
belonging to a seed and pod trait-specific association panel using reference genome-and …

[HTML][HTML] Exploring chickpea germplasm diversity for broadening the genetic base utilizing genomic resourses

RK Singh, C Singh, Ambika, BS Chandana… - Frontiers in …, 2022 - frontiersin.org
Legume crops provide significant nutrition to humans as a source of protein, omega-3 fatty
acids as well as specific macro and micronutrients. Additionally, legumes improve the …