[HTML][HTML] miRWalk–database: prediction of possible miRNA binding sites by “walking” the genes of three genomes
H Dweep, C Sticht, P Pandey, N Gretz - Journal of biomedical informatics, 2011 - Elsevier
MicroRNAs are small, non-coding RNA molecules that can complementarily bind to the
mRNA 3′-UTR region to regulate the gene expression by transcriptional repression or …
mRNA 3′-UTR region to regulate the gene expression by transcriptional repression or …
Tools for sequence-based miRNA target prediction: what to choose?
ÁL Riffo-Campos, I Riquelme… - International journal of …, 2016 - mdpi.com
MicroRNAs (miRNAs) are defined as small non-coding RNAs~ 22 nt in length. They regulate
gene expression at a post-transcriptional level through complementary base pairing with the …
gene expression at a post-transcriptional level through complementary base pairing with the …
Comprehensive analysis of human microRNA target networks
J Satoh, H Tabunoki - BioData mining, 2011 - Springer
Background MicroRNAs (miRNAs) mediate posttranscriptional regulation of protein-coding
genes by binding to the 3'untranslated region of target mRNAs, leading to translational …
genes by binding to the 3'untranslated region of target mRNAs, leading to translational …
miRDB: an online database for prediction of functional microRNA targets
MicroRNAs (miRNAs) are small noncoding RNAs that act as master regulators in many
biological processes. miRNAs function mainly by downregulating the expression of their …
biological processes. miRNAs function mainly by downregulating the expression of their …
Trends in the development of miRNA bioinformatics tools
L Chen, L Heikkinen, C Wang, Y Yang… - Briefings in …, 2019 - academic.oup.com
MicroRNAs (miRNAs) are small noncoding RNAs that regulate gene expression via
recognition of cognate sequences and interference of transcriptional, translational or …
recognition of cognate sequences and interference of transcriptional, translational or …
miRWalk: an online resource for prediction of microRNA binding sites
C Sticht, C De La Torre, A Parveen, N Gretz - PloS one, 2018 - journals.plos.org
miRWalk is an open-source platform providing an intuitive interface that generates predicted
and validated miRNA-binding sites of known genes of human, mouse, rat, dog and cow. The …
and validated miRNA-binding sites of known genes of human, mouse, rat, dog and cow. The …
Global correlation analysis for micro-RNA and mRNA expression profiles in human cell lines
Y Ruike, A Ichimura, S Tsuchiya, K Shimizu… - Journal of human …, 2008 - nature.com
Microribonucleic acids (miRNAs) are small noncoding RNAs that negatively regulate gene
expression at the posttranscriptional level. Although considerable progress has been made …
expression at the posttranscriptional level. Although considerable progress has been made …
Got target?: computational methods for microRNA target prediction and their extension
H Min, S Yoon - Experimental & molecular medicine, 2010 - nature.com
MicroRNAs (miRNAs) are a class of small RNAs of 19-23 nucleotides that regulate gene
expression through target mRNA degradation or translational gene silencing. The miRNAs …
expression through target mRNA degradation or translational gene silencing. The miRNAs …
MirZ: an integrated microRNA expression atlas and target prediction resource
J Hausser, P Berninger, C Rodak… - Nucleic acids …, 2009 - academic.oup.com
MicroRNAs (miRNAs) are short RNAs that act as guides for the degradation and
translational repression of protein-coding mRNAs. A large body of work showed that …
translational repression of protein-coding mRNAs. A large body of work showed that …
miRNAMap: genomic maps of microRNA genes and their target genes in mammalian genomes
PWC Hsu, HD Huang, SD Hsu, LZ Lin… - Nucleic acids …, 2006 - academic.oup.com
Recent work has demonstrated that microRNAs (miRNAs) are involved in critical biological
processes by suppressing the translation of coding genes. This work develops an integrated …
processes by suppressing the translation of coding genes. This work develops an integrated …