The genomic code: A pervasive encoding/molding of chromatin structures and a solution of the “non‐coding DNA” mystery

G Bernardi - BioEssays, 2019 - Wiley Online Library
Recent investigations have revealed 1) that the isochores of the human genome group into
two super‐families characterized by two different long‐range 3D structures, and 2) that these …

The short-sequence design of DNA and its involvement in the 3-D structure of the genome

G Lamolle, V Sabbia, H Musto, G Bernardi - Scientific Reports, 2018 - nature.com
Recent investigations have shown that isochores are characterized by a 3-D structure which
is primarily responsible for the topology of chromatin domains. More precisely, an analysis of …

The “genomic code”: DNA pervasively moulds chromatin structures leaving no room for “Junk”

G Bernardi - Life, 2021 - mdpi.com
The chromatin of the human genome was analyzed at three DNA size levels. At the first,
compartment level, two “gene spaces” were found many years ago: A GC-rich, gene-rich …

Genome organization and chromosome architecture

G Bernardi - Cold Spring Harbor symposia on quantitative …, 2015 - symposium.cshlp.org
How the same DNA sequences can function in the three-dimensional architecture of
interphase nucleus, fold in the very compact structure of metaphase chromosomes, and go …

Mini review: form and function in the human interphase chromosome

E Chevret, EV Volpi, D Sheer - Cytogenetics and cell genetics, 2000 - karger.com
A key feature of interphase chromosomes is their compaction into discrete “territories” in the
nucleus. In this review, we focus on the compartmentalization of the genome conferred by …

Chromosome architecture and genome organization

G Bernardi - PLoS One, 2015 - journals.plos.org
How the same DNA sequences can function in the three-dimensional architecture of
interphase nucleus, fold in the very compact structure of metaphase chromosomes and go …

An isochore framework underlies chromatin architecture

K Jabbari, G Bernardi - PloS one, 2017 - journals.plos.org
A recent investigation showed the existence of correlations between the architectural
features of mammalian interphase chromosomes and the compositional properties of …

Packaging the genome: the structure of mitotic chromosomes

K Maeshima, M Eltsov - Journal of biochemistry, 2008 - academic.oup.com
Mitotic chromosomes are essential structures for the faithful transmission of duplicated
genomic DNA into two daughter cells during cell division. Although more than 100 years …

Potential genetic functions of tandem repeated DNA sequence blocks in the human genome are based on a highly conserved “chromatin folding code”

P Vogt - Human genetics, 1990 - Springer
This review is based on a thorough description of the structure and sequence organization
of tandemly organized repetitive DNA sequence families in the human genome; it is aimed …

Organizational principles of 3D genome architecture

MJ Rowley, VG Corces - Nature Reviews Genetics, 2018 - nature.com
Studies of 3D chromatin organization have suggested that chromosomes are hierarchically
organized into large compartments composed of smaller domains called topologically …