Improving bioinformatics prediction of microRNA targets by ranks aggregation
microRNAs are noncoding RNAs which downregulate a large number of target mRNAs and
modulate cell activity. Despite continued progress, bioinformatics prediction of microRNA …
modulate cell activity. Despite continued progress, bioinformatics prediction of microRNA …
mirDIP 4.1—integrative database of human microRNA target predictions
MicroRNAs are important regulators of gene expression, achieved by binding to the gene to
be regulated. Even with modern high-throughput technologies, it is laborious and expensive …
be regulated. Even with modern high-throughput technologies, it is laborious and expensive …
Accurate microRNA target prediction correlates with protein repression levels
M Maragkakis, P Alexiou, GL Papadopoulos… - BMC …, 2009 - Springer
Background MicroRNAs are small endogenously expressed non-coding RNA molecules
that regulate target gene expression through translation repression or messenger RNA …
that regulate target gene expression through translation repression or messenger RNA …
miRDB: an online database for prediction of functional microRNA targets
MicroRNAs (miRNAs) are small noncoding RNAs that act as master regulators in many
biological processes. miRNAs function mainly by downregulating the expression of their …
biological processes. miRNAs function mainly by downregulating the expression of their …
Improving microRNA target prediction with gene expression profiles
Background Mammalian genomes encode for thousands of microRNAs, which can
potentially regulate the majority of protein-coding genes. They have been implicated in …
potentially regulate the majority of protein-coding genes. They have been implicated in …
Improving performance of mammalian microRNA target prediction
Background MicroRNAs (miRNAs) are single-stranded non-coding RNAs known to regulate
a wide range of cellular processes by silencing the gene expression at the protein and/or …
a wide range of cellular processes by silencing the gene expression at the protein and/or …
miRmap web: comprehensive microRNA target prediction online
MicroRNAs (miRNAs) posttranscriptionally repress the expression of protein-coding genes.
Based on the partial complementarity between miRNA and messenger RNA pairs with a …
Based on the partial complementarity between miRNA and messenger RNA pairs with a …
miRSystem: an integrated system for characterizing enriched functions and pathways of microRNA targets
Background Many prediction tools for microRNA (miRNA) targets have been developed, but
inconsistent predictions were observed across multiple algorithms, which can make further …
inconsistent predictions were observed across multiple algorithms, which can make further …
Comparison and integration of target prediction algorithms for microRNA studies
Y Zhang, FJ Verbeek - Journal of integrative bioinformatics, 2010 - degruyter.com
Summary microRNAs are short RNA fragments that have the capacity of regulating
hundreds of target gene expression. Currently, due to lack of high-throughput experimental …
hundreds of target gene expression. Currently, due to lack of high-throughput experimental …
Computational prediction of microRNA target genes, target prediction databases, and web resources
JT Roberts, GM Borchert - Bioinformatics in microRNA research, 2017 - Springer
MicroRNA (miRNA) mediated silencing and repression of mRNA molecules requires
complementary base pairing between the “seed” region of the miRNA and the “seed match” …
complementary base pairing between the “seed” region of the miRNA and the “seed match” …