[HTML][HTML] Single-cell lineage tracing of metastatic cancer reveals selection of hybrid EMT states
The underpinnings of cancer metastasis remain poorly understood, in part due to a lack of
tools for probing their emergence at high resolution. Here we present macsGESTALT, an …
tools for probing their emergence at high resolution. Here we present macsGESTALT, an …
Single-cell lineages reveal the rates, routes, and drivers of metastasis in cancer xenografts
INTRODUCTION Cancer progression is fundamentally an evolutionary process, involving
multiple distinct steps from oncogenic transformation to metastatic dissemination to …
multiple distinct steps from oncogenic transformation to metastatic dissemination to …
[HTML][HTML] Spatial CRISPR genomics identifies regulators of the tumor microenvironment
While CRISPR screens are helping uncover genes regulating many cell-intrinsic processes,
existing approaches are suboptimal for identifying extracellular gene functions, particularly …
existing approaches are suboptimal for identifying extracellular gene functions, particularly …
Multiplexed detection of proteins, transcriptomes, clonotypes and CRISPR perturbations in single cells
EP Mimitou, A Cheng, A Montalbano, S Hao… - Nature …, 2019 - nature.com
Multimodal single-cell assays provide high-resolution snapshots of complex cell
populations, but are mostly limited to transcriptome plus an additional modality. Here, we …
populations, but are mostly limited to transcriptome plus an additional modality. Here, we …
In vivo profiling of metastatic double knockouts through CRISPR–Cpf1 screens
Systematic investigation of the genetic interactions that influence metastatic potential has
been challenging. Here we developed massively parallel CRISPR–Cpf1/Cas12a crRNA …
been challenging. Here we developed massively parallel CRISPR–Cpf1/Cas12a crRNA …
Mapping a functional cancer genome atlas of tumor suppressors in mouse liver using AAV-CRISPR–mediated direct in vivo screening
Cancer genomics consortia have charted the landscapes of numerous human cancers.
Whereas some mutations were found in classical oncogenes and tumor suppressors, others …
Whereas some mutations were found in classical oncogenes and tumor suppressors, others …
[HTML][HTML] CRISPR-barcoding for intratumor genetic heterogeneity modeling and functional analysis of oncogenic driver mutations
A Guernet, SK Mungamuri, D Cartier… - Molecular cell, 2016 - cell.com
Intratumor genetic heterogeneity underlies the ability of tumors to evolve and adapt to
different environmental conditions. Using CRISPR/Cas9 technology and specific DNA …
different environmental conditions. Using CRISPR/Cas9 technology and specific DNA …
[HTML][HTML] High-throughput single-cell chromatin accessibility CRISPR screens enable unbiased identification of regulatory networks in cancer
Chromatin accessibility profiling can identify putative regulatory regions genome wide;
however, pooled single-cell methods for assessing the effects of regulatory perturbations on …
however, pooled single-cell methods for assessing the effects of regulatory perturbations on …
[HTML][HTML] Genome-wide CRISPR screen in a mouse model of tumor growth and metastasis
Genetic screens are powerful tools for identifying genes responsible for diverse phenotypes.
Here we describe a genome-wide CRISPR/Cas9-mediated loss-of-function screen in tumor …
Here we describe a genome-wide CRISPR/Cas9-mediated loss-of-function screen in tumor …
[HTML][HTML] Multiplexed pancreatic genome engineering and cancer induction by transfection-based CRISPR/Cas9 delivery in mice
R Maresch, S Mueller, C Veltkamp, R Öllinger… - Nature …, 2016 - nature.com
Mouse transgenesis has provided fundamental insights into pancreatic cancer, but is limited
by the long duration of allele/model generation. Here we show transfection-based …
by the long duration of allele/model generation. Here we show transfection-based …