FireProt 2.0: web-based platform for the fully automated design of thermostable proteins
M Musil, A Jezik, J Horackova, S Borko… - Briefings in …, 2024 - academic.oup.com
Thermostable proteins find their use in numerous biomedical and biotechnological
applications. However, the computational design of stable proteins often results in single …
applications. However, the computational design of stable proteins often results in single …
FireProt: web server for automated design of thermostable proteins
There is a continuous interest in increasing proteins stability to enhance their usability in
numerous biomedical and biotechnological applications. A number of in silico tools for the …
numerous biomedical and biotechnological applications. A number of in silico tools for the …
Stabilizing proteins, simplified: a Rosetta‐based webtool for predicting favorable mutations
Many proteins have low thermodynamic stability, which can lead to low expression yields
and limit functionality in research, industrial and clinical settings. This article introduces two …
and limit functionality in research, industrial and clinical settings. This article introduces two …
PROTS: A fragment based protein thermo‐stability potential
Designing proteins with enhanced thermo‐stability has been a main focus of protein
engineering because of its theoretical and practical significance. Despite extensive studies …
engineering because of its theoretical and practical significance. Despite extensive studies …
Engineering functional thermostable proteins using ancestral sequence reconstruction
RES Thomson, SE Carrera-Pacheco… - Journal of Biological …, 2022 - ASBMB
Natural proteins are often only slightly more stable in the native state than the denatured
state, and an increase in environmental temperature can easily shift the balance toward …
state, and an increase in environmental temperature can easily shift the balance toward …
Protein thermal stability engineering using HoTMuSiC
The rational design of enzymes is a challenging research field, which plays an important
role in the optimization of a wide series of biotechnological processes. Computational …
role in the optimization of a wide series of biotechnological processes. Computational …
FireProt: energy-and evolution-based computational design of thermostable multiple-point mutants
D Bednar, K Beerens, E Sebestova… - PLoS computational …, 2015 - journals.plos.org
There is great interest in increasing proteins' stability to enhance their utility as biocatalysts,
therapeutics, diagnostics and nanomaterials. Directed evolution is a powerful, but …
therapeutics, diagnostics and nanomaterials. Directed evolution is a powerful, but …
Structure-and sequence-analysis inspired engineering of proteins for enhanced thermostability
Highlights•Targeting critical sites for stability improvement.•Consensus/ancestral sequence
based protein stabilization.•Computational design of thermostability.•Loop grafting and …
based protein stabilization.•Computational design of thermostability.•Loop grafting and …
PROSS 2: a new server for the design of stable and highly expressed protein variants
Many natural and designed proteins are only marginally stable limiting their usefulness in
research and applications. Recently, we described an automated structure and sequence …
research and applications. Recently, we described an automated structure and sequence …
Strategies for increasing protein stability
PG Chandler, SS Broendum, BT Riley… - Protein Nanotechnology …, 2020 - Springer
The stability of wild-type proteins is often a hurdle to their practical use in research, industry,
and medicine. The route to engineering stability of a protein of interest lies largely with the …
and medicine. The route to engineering stability of a protein of interest lies largely with the …