[HTML][HTML] Uncovering SNP and indel variations of tetraploid cottons by SLAF-seq
C Shen, X Jin, D Zhu, Z Lin - BMC genomics, 2017 - Springer
Abstract Background Cotton (Gossypium spp.), as the world's most utilized textile fibre
source, is an important, economically valuable crop worldwide. Understanding the genomic …
source, is an important, economically valuable crop worldwide. Understanding the genomic …
[HTML][HTML] Development of chromosome-specific markers with high polymorphism for allotetraploid cotton based on genome-wide characterization of simple sequence …
C Lu, C Zou, Y Zhang, D Yu, H Cheng, P Jiang… - BMC genomics, 2015 - Springer
Background Tetraploid cotton contains two sets of homologous chromosomes, the At-and Dt-
subgenomes. Consequently, many markers in cotton were mapped to multiple positions …
subgenomes. Consequently, many markers in cotton were mapped to multiple positions …
[HTML][HTML] Sequencing multiple cotton genomes reveals complex structures and lays foundation for breeding
Y Pan, F Meng, X Wang - Frontiers in Plant Science, 2020 - frontiersin.org
Cotton is a major fiber plant, which provides raw materials for clothing, protecting humans
from the harsh environment of cold or hot weathers, enriching the culture and custom of …
from the harsh environment of cold or hot weathers, enriching the culture and custom of …
[HTML][HTML] Molecular mapping of restriction-site associated DNA markers in allotetraploid upland cotton
Y Wang, Z Ning, Y Hu, J Chen, R Zhao, H Chen, N Ai… - PLoS …, 2015 - journals.plos.org
Upland cotton (Gossypium hirsutum L., 2n= 52, AADD) is an allotetraploid, therefore the
discovery of single nucleotide polymorphism (SNP) markers is difficult. The recent …
discovery of single nucleotide polymorphism (SNP) markers is difficult. The recent …
[HTML][HTML] Toward allotetraploid cotton genome assembly: integration of a high-density molecular genetic linkage map with DNA sequence information
Background Cotton is the world's most important natural textile fiber and a significant oilseed
crop. Decoding cotton genomes will provide the ultimate reference and resource for …
crop. Decoding cotton genomes will provide the ultimate reference and resource for …
[HTML][HTML] Transcriptome analysis of extant cotton progenitors revealed tetraploidization and identified genome-specific single nucleotide polymorphism in diploid and …
Background The most widely cultivated cotton (Gossypium hirsutum L., AD-genome) is
derived from tetraploidization between A-and D-genome species. G. arboreum L.(A …
derived from tetraploidization between A-and D-genome species. G. arboreum L.(A …
[HTML][HTML] Sequence-based ultra-dense genetic and physical maps reveal structural variations of allopolyploid cotton genomes
S Wang, J Chen, W Zhang, Y Hu, L Chang, L Fang… - Genome biology, 2015 - Springer
Background SNPs are the most abundant polymorphism type, and have been explored in
many crop genomic studies, including rice and maize. SNP discovery in allotetraploid cotton …
many crop genomic studies, including rice and maize. SNP discovery in allotetraploid cotton …
Transcriptome and Complexity-Reduced, DNA-Based Identification of Intraspecies Single-Nucleotide Polymorphisms in the Polyploid Gossypium hirsutum L.
QH Zhu, A Spriggs, JM Taylor… - G3: Genes, Genomes …, 2014 - academic.oup.com
Varietal single nucleotide polymorphisms (SNPs) are the differences within one of the two
subgenomes between different tetraploid cotton varieties and have not been practically used …
subgenomes between different tetraploid cotton varieties and have not been practically used …
[HTML][HTML] Genetic dissection of an allotetraploid interspecific CSSLs guides interspecific genetics and breeding in cotton
D Zhu, X Li, Z Wang, C You, X Nie, J Sun, X Zhang… - BMC genomics, 2020 - Springer
Background The low genetic diversity of Upland cotton limits the potential for genetic
improvement. Making full use of the genetic resources of Sea-island cotton will facilitate …
improvement. Making full use of the genetic resources of Sea-island cotton will facilitate …
Insights into the evolution of cotton diploids and polyploids from whole-genome re-sequencing
JT Page, MD Huynh, ZS Liechty, K Grupp… - G3: Genes …, 2013 - academic.oup.com
Understanding the composition, evolution, and function of the Gossypium hirsutum (cotton)
genome is complicated by the joint presence of two genomes in its nucleus (AT and DT …
genome is complicated by the joint presence of two genomes in its nucleus (AT and DT …