Chemical RNA cross-linking: mechanisms, computational analysis, and biological applications
In recent years, RNA has emerged as a multifaceted biomolecule that is involved in virtually
every function of the cell and is critical for human health. This has led to a substantial …
every function of the cell and is critical for human health. This has led to a substantial …
[PDF][PDF] Targeting RNA with small molecules
Y Tor - ChemBioChem, 2003 - academia.edu
Remarkable findings have cemented the central dogma of biology, where the transfer of
genetic information from a sequence of nucleotides in DNA to a string of amino acids in …
genetic information from a sequence of nucleotides in DNA to a string of amino acids in …
Genome-wide mapping of cellular protein–RNA interactions enabled by chemical crosslinking
RNA–protein interactions influence many biological processes. Identifying the binding sites
of RNA-binding proteins (RBPs) remains one of the most fundamental and important …
of RNA-binding proteins (RBPs) remains one of the most fundamental and important …
Small molecule approaches to targeting RNA
S Kovachka, M Panosetti, B Grimaldi… - Nature Reviews …, 2024 - nature.com
The development of innovative methodologies to identify RNA binders has attracted
enormous attention in chemical biology and drug discovery. Although antibiotics targeting …
enormous attention in chemical biology and drug discovery. Although antibiotics targeting …
Genetically encoded chemical crosslinking of RNA in vivo
Protein–RNA interactions regulate RNA fate and function, and defects can lead to various
disorders. Such interactions have mainly been studied by nucleoside-based UV crosslinking …
disorders. Such interactions have mainly been studied by nucleoside-based UV crosslinking …
Modeling of ribonucleic acid–ligand interactions
F Stefaniak, EI Chudyk, M Bodkin… - Wiley …, 2015 - Wiley Online Library
Computational methods play a pivotal role in the early stages of small molecule drug
discovery and are widely applied in virtual screening, structure optimization, and compound …
discovery and are widely applied in virtual screening, structure optimization, and compound …
Development of an RNA–protein crosslinker to capture protein interactions with diverse RNA structures in cells
Y Han, X Guo, T Zhang, J Wang, K Ye - Rna, 2022 - rnajournal.cshlp.org
Characterization of RNA–protein interaction is fundamental for understanding the
metabolism and function of RNA. UV crosslinking has been widely used to map the targets …
metabolism and function of RNA. UV crosslinking has been widely used to map the targets …
Methods for identifying and characterizing interactions involving RNA
Modern organic chemistry enables practitioners of the art to controllably synthesize an
enormous array of structures with diverse molecular architectures, functional group …
enormous array of structures with diverse molecular architectures, functional group …
A structural basis for RNA− ligand interactions
CS Chow, FM Bogdan - Chemical Reviews, 1997 - ACS Publications
A considerable amount of attention has focused recently on new RNA-binding molecules.
The interactions between RNA and biological macromolecules are clearly essential for …
The interactions between RNA and biological macromolecules are clearly essential for …
[HTML][HTML] Using the structural diversity of RNA: protein interfaces to selectively target RNA with small molecules in cells: methods and perspectives
A Li, A Bouhss, MJ Clément, C Bauvais… - Frontiers in Molecular …, 2023 - ncbi.nlm.nih.gov
In recent years, RNA has gained traction both as a therapeutic molecule and as a
therapeutic target in several human pathologies. In this review, we consider the approach of …
therapeutic target in several human pathologies. In this review, we consider the approach of …