A gene-by-gene population genomics platform: de novo assembly, annotation and genealogical analysis of 108 representative Neisseria meningitidis genomes
Background Highly parallel,'second generation'sequencing technologies have rapidly
expanded the number of bacterial whole genome sequences available for study, permitting …
expanded the number of bacterial whole genome sequences available for study, permitting …
NeMeSys: a biological resource for narrowing the gap between sequence and function in the human pathogen Neisseria meningitidis
C Rusniok, D Vallenet, S Floquet, H Ewles… - Genome biology, 2009 - Springer
Background Genome sequences, now available for most pathogens, hold promise for the
rational design of new therapies. However, biological resources for genome-scale …
rational design of new therapies. However, biological resources for genome-scale …
Population and functional genomics of Neisseria revealed with gene-by-gene approaches
MCJ Maiden, OB Harrison - Journal of clinical microbiology, 2016 - Am Soc Microbiol
Rapid low-cost whole-genome sequencing (WGS) is revolutionizing microbiology; however,
complementary advances in accessible, reproducible, and rapid analysis techniques are …
complementary advances in accessible, reproducible, and rapid analysis techniques are …
Large-scale analysis of the meningococcus genome by gene disruption: resistance to complement-mediated lysis
MC Geoffroy, S Floquet, A Métais, X Nassif… - Genome …, 2003 - genome.cshlp.org
The biologic role of a majority of the Neisseria meningitidis 2100 predicted coding regions is
still to be assigned or experimentally confirmed. Determining the phenotypic effect of gene …
still to be assigned or experimentally confirmed. Determining the phenotypic effect of gene …
Neisseria meningitidis: using genomics to understand diversity, evolution and pathogenesis
DA Caugant, OB Brynildsrud - Nature Reviews Microbiology, 2020 - nature.com
Meningococcal disease remains an important cause of morbidity and death worldwide
despite the development and increasing implementation of effective vaccines. Elimination of …
despite the development and increasing implementation of effective vaccines. Elimination of …
Whole-genome comparison of disease and carriage strains provides insights into virulence evolution in Neisseria meningitidis
C Schoen, J Blom, H Claus… - Proceedings of the …, 2008 - National Acad Sciences
Neisseria meningitidis is a leading cause of infectious childhood mortality worldwide. Most
research efforts have hitherto focused on disease isolates belonging to only a few …
research efforts have hitherto focused on disease isolates belonging to only a few …
Independent evolution of the core and accessory gene sets in the genus Neisseria: insights gained from the genome of Neisseria lactamica isolate 020-06
Abstract Background The genus Neisseria contains two important yet very different
pathogens, N. meningitidis and N. gonorrhoeae, in addition to non-pathogenic species, of …
pathogens, N. meningitidis and N. gonorrhoeae, in addition to non-pathogenic species, of …
Validation of a bioinformatics workflow for routine analysis of whole-genome sequencing data and related challenges for pathogen typing in a European National …
B Bogaerts, R Winand, Q Fu, J Van Braekel… - Frontiers in …, 2019 - frontiersin.org
Despite being a well-established research method, the use of whole-genome sequencing
(WGS) for routine molecular typing and pathogen characterization remains a substantial …
(WGS) for routine molecular typing and pathogen characterization remains a substantial …
Homologous Recombination Drives Both Sequence Diversity and Gene Content Variation in Neisseria meningitidis
Y Kong, JH Ma, K Warren, RSW Tsang… - Genome biology and …, 2013 - academic.oup.com
The study of genetic and phenotypic variation is fundamental for understanding the
dynamics of bacterial genome evolution and untangling the evolution and epidemiology of …
dynamics of bacterial genome evolution and untangling the evolution and epidemiology of …
A phylogenetic method to perform genome-wide association studies in microbes that accounts for population structure and recombination
Genome-Wide Association Studies (GWAS) in microbial organisms have the potential to
vastly improve the way we understand, manage, and treat infectious diseases. Yet, microbial …
vastly improve the way we understand, manage, and treat infectious diseases. Yet, microbial …