Diversity and population-genetic properties of copy number variations and multicopy genes in cattle
DM Bickhart, L Xu, JL Hutchison, JB Cole… - DNA …, 2016 - academic.oup.com
The diversity and population genetics of copy number variation (CNV) in domesticated
animals are not well understood. In this study, we analysed 75 genomes of major taurine …
animals are not well understood. In this study, we analysed 75 genomes of major taurine …
Copy number variation of individual cattle genomes using next-generation sequencing
DM Bickhart, Y Hou, SG Schroeder, C Alkan… - Genome …, 2012 - genome.cshlp.org
Copy number variations (CNVs) affect a wide range of phenotypic traits; however, CNVs in
or near segmental duplication regions are often intractable. Using a read depth approach …
or near segmental duplication regions are often intractable. Using a read depth approach …
Evolutionary and functional features of copy number variation in the cattle genome
BN Keel, AK Lindholm-Perry, WM Snelling - Frontiers in genetics, 2016 - frontiersin.org
Genomic structural variations are an important source of genetic diversity. Copy number
variations (CNVs), gains and losses of large regions of genomic sequence between …
variations (CNVs), gains and losses of large regions of genomic sequence between …
Analysis of copy number variations among diverse cattle breeds
Genomic structural variation is an important and abundant source of genetic and phenotypic
variation. Here, we describe the first systematic and genome-wide analysis of copy number …
variation. Here, we describe the first systematic and genome-wide analysis of copy number …
Analysis of copy number variants in the cattle genome
JW Kijas, W Barendse, W Barris, B Harrison… - Gene, 2011 - Elsevier
Copy number variation (CNV) is likely to be an important component of heritable variation in
livestock. To characterise CNVs in cattle, we performed a genome wide survey to determine …
livestock. To characterise CNVs in cattle, we performed a genome wide survey to determine …
Diversity of copy number variation in the worldwide goat population
M Liu, Y Zhou, BD Rosen, CP Van Tassell, A Stella… - Heredity, 2019 - nature.com
Goats (Capra hircus) are an important farm animal species. Copy number variation (CNV)
represents a major source of genomic structural variation. We investigated the diversity of …
represents a major source of genomic structural variation. We investigated the diversity of …
Landscape of copy number variations in Bos taurus: individual – and inter-breed variability
Background The number of studies of Copy Number Variation in cattle has increased in
recent years. This has been prompted by the increased availability of data on …
recent years. This has been prompted by the increased availability of data on …
A survey of copy number variation in the porcine genome detected from whole-genome sequence
BN Keel, DJ Nonneman, AK Lindholm-Perry… - Frontiers in …, 2019 - frontiersin.org
Copy number variations (CNVs) are gains and losses of large regions of genomic sequence
between individuals of a species. Although CNVs have been associated with various …
between individuals of a species. Although CNVs have been associated with various …
Detection of copy number variations and their effects in Chinese bulls
Abstract Background Copy number variations (CNVs) are a main source of genomic
structural variations underlying animal evolution and production traits. Here, with one pure …
structural variations underlying animal evolution and production traits. Here, with one pure …
Population-genetic properties of differentiated copy number variations in cattle
L Xu, Y Hou, DM Bickhart, Y Zhou, EHA Hay, J Song… - Scientific reports, 2016 - nature.com
While single nucleotide polymorphism (SNP) is typically the variant of choice for population
genetics, copy number variation (CNV) which comprises insertion, deletion and duplication …
genetics, copy number variation (CNV) which comprises insertion, deletion and duplication …