Length variation in short tandem repeats affects gene expression in natural populations of Arabidopsis thaliana
The genetic basis for the fine-tuned regulation of gene expression is complex and ultimately
influences the phenotype and thus the local adaptation of natural populations. Short tandem …
influences the phenotype and thus the local adaptation of natural populations. Short tandem …
Massive variation of short tandem repeats with functional consequences across strains of Arabidopsis thaliana
Short tandem repeat (STR) mutations may comprise more than half of the mutations in
eukaryotic coding DNA, yet STR variation is rarely examined as a contributor to complex …
eukaryotic coding DNA, yet STR variation is rarely examined as a contributor to complex …
Variability in a Short Tandem Repeat Mediates Complex Epistatic Interactions in Arabidopsis thaliana
MO Press, C Queitsch - Genetics, 2017 - academic.oup.com
Short tandem repeats (STRs) are hypervariable genetic elements that occur frequently in
coding regions. Their high mutation rate readily generates genetic variation, contributing to …
coding regions. Their high mutation rate readily generates genetic variation, contributing to …
Plant simple sequence repeats: distribution, variation, and effects on gene expression
N Sharopova - Genome, 2008 - cdnsciencepub.com
Genome-wide simple sequence repeat (SSR) information was analyzed together with
functional annotations of Arabidopsis genes and public gene expression data for …
functional annotations of Arabidopsis genes and public gene expression data for …
[HTML][HTML] Intergenic and genic sequence lengths have opposite relationships with respect to gene expression
Eukaryotic genomes are mostly composed of noncoding DNA whose role is still poorly
understood. Studies in several organisms have shown correlations between the length of …
understood. Studies in several organisms have shown correlations between the length of …
Widespread inter‐individual gene expression variability in Arabidopsis thaliana
S Cortijo, Z Aydin, S Ahnert… - Molecular systems biology, 2019 - embopress.org
A fundamental question in biology is how gene expression is regulated to give rise to a
phenotype. However, transcriptional variability is rarely considered although it could …
phenotype. However, transcriptional variability is rarely considered although it could …
Polymorphism revealed by simple sequence repeats
W Powell, GC Machray, J Provan - Trends in plant science, 1996 - cell.com
Simple sequence repeats (SSRs) are a group of repetitive DNA sequences that represent a
significant portion of higher eukaryote genomes. They can serve as highly informative …
significant portion of higher eukaryote genomes. They can serve as highly informative …
[HTML][HTML] Distinct patterns of SSR distribution in the Arabidopsis thalianaand rice genomes
Abstract Background Simple sequence repeats (SSRs) in DNA have been traditionally
thought of as functionally unimportant and have been studied mainly as genetic markers. A …
thought of as functionally unimportant and have been studied mainly as genetic markers. A …
Inferring short tandem repeat variation from paired-end short reads
MD Cao, E Tasker, K Willadsen, M Imelfort… - Nucleic acids …, 2014 - academic.oup.com
The advances of high-throughput sequencing offer an unprecedented opportunity to study
genetic variation. This is challenged by the difficulty of resolving variant calls in repetitive …
genetic variation. This is challenged by the difficulty of resolving variant calls in repetitive …
[HTML][HTML] A Genome-Wide Association Analysis Reveals Epistatic Cancellation of Additive Genetic Variance for Root Length in Arabidopsis thaliana
Efforts to identify loci underlying complex traits generally assume that most genetic variance
is additive. Here, we examined the genetics of Arabidopsis thaliana root length and found …
is additive. Here, we examined the genetics of Arabidopsis thaliana root length and found …
相关搜索
- length variation natural populations
- length variation arabidopsis thaliana
- arabidopsis thaliana natural populations
- length variation gene expression
- gene expression natural populations
- arabidopsis thaliana gene expression
- repeat variation short reads
- arabidopsis thaliana rice genomes
- gene expression sequence repeats
- arabidopsis thaliana association analysis
- green algae tandem repeats
- arabidopsis thaliana ssr distribution
- arabidopsis thaliana functional consequences
- arabidopsis thaliana root length
- gene expression sequence lengths
- arabidopsis thaliana massive variation