Probing protein ubiquitination in live cells

W Qin, C Steinek, K Kolobynina, I Forné… - Nucleic Acids …, 2022 - academic.oup.com
The reversible attachment of ubiquitin governs the interaction, activity and degradation of
proteins whereby the type and target of this conjugation determine the biological response …

Detection of protein ubiquitination

YS Choo, Z Zhang - JoVE (Journal of Visualized Experiments), 2009 - jove.com
Ubiquitination, the covalent attachment of the polypeptide ubiquitin to target proteins, is a
key posttranslational modification carried out by a set of three enzymes. They include …

[HTML][HTML] Preparation and purification of mono-ubiquitinated proteins using Avi-tagged ubiquitin

W Tan, VJ Murphy, A Charron, S van Twest, M Sharp… - PLoS …, 2020 - journals.plos.org
Site-specific conjugation of ubiquitin onto a range of DNA repair proteins regulates their
critical functions in the DNA damage response. Biochemical and structural characterization …

Measuring ubiquitin conjugation in cells

EG Mimnaugh, LM Neckers - Ubiquitin-Proteasome Protocols, 2005 - Springer
Protein ubiquitination is crucial to many diverse and critical functions of cells. Although it has
been long known that conjugation of ubiquitin to proteins results in their destruction by the …

Isolation of ubiquitinated proteins to high purity from in vivo samples

J Ramirez, M Min, R Barrio, C Lindon… - Proteostasis: Methods and …, 2016 - Springer
Ubiquitination pathways are widely used within eukaryotic cells. The complexity of ubiquitin
signaling gives rise to a number of problems in the study of specific pathways. One problem …

[HTML][HTML] Optimising methods for the preservation, capture and identification of ubiquitin chains and ubiquitylated proteins by immunoblotting

CH Emmerich, P Cohen - Biochemical and biophysical research …, 2015 - Elsevier
Immunoblotting is a powerful technique for the semi-quantitative analysis of ubiquitylation
events, and remains the most commonly used method to study this process due to its high …

Functional analysis of protein ubiquitination

G Levy-Cohen, M Blank - Analytical biochemistry, 2015 - Elsevier
Alterations in the protein ubiquitination can lead to the development of serious pathological
conditions and diseases and, therefore, are under extensive investigation. Here we detail …

[HTML][HTML] The parallel reaction monitoring method contributes to a highly sensitive polyubiquitin chain quantification

H Tsuchiya, K Tanaka, Y Saeki - Biochemical and biophysical research …, 2013 - Elsevier
Ubiquitylation is an essential posttranslational protein modification that is implicated in a
diverse array of cellular functions. Although cells contain eight structurally distinct types of …

[HTML][HTML] A high-throughput assay for monitoring ubiquitination in real time

TG Franklin, JN Pruneda - Frontiers in Chemistry, 2019 - frontiersin.org
Protein ubiquitination is a highly orchestrated process that controls diverse aspects of
human biology. Dysregulation of this process can lead to various disease states including …

[HTML][HTML] Current methodologies in protein ubiquitination characterization: from ubiquitinated protein to ubiquitin chain architecture

M Sun, X Zhang - Cell & Bioscience, 2022 - Springer
Ubiquitination is a versatile post-translational modification (PTM), which regulates diverse
fundamental features of protein substrates, including stability, activity, and localization …