[PDF][PDF] RNA exosome-regulated long non-coding RNA transcription controls super-enhancer activity

E Pefanis, J Wang, G Rothschild, J Lim, D Kazadi… - Cell, 2015 - cell.com
We have ablated the cellular RNA degradation machinery in differentiated B cells and
pluripotent embryonic stem cells (ESCs) by conditional mutagenesis of core (Exosc3) and …

[HTML][HTML] Long noncoding RNAs usher in a new era in the biology of enhancers

UA Ørom, R Shiekhattar - Cell, 2013 - cell.com
Enhancer-associated long noncoding RNAs act over long distances and across
chromosomes to activate transcription at distal promoters. Here, we address the latest …

The human cap-binding complex is functionally connected to the nuclear RNA exosome

PR Andersen, M Domanski, MS Kristiansen… - Nature structural & …, 2013 - nature.com
Nuclear processing and quality control of eukaryotic RNA is mediated by the RNA exosome,
which is regulated by accessory factors. However, the mechanism of exosome recruitment to …

The regulation and functions of the nuclear RNA exosome complex

C Kilchert, S Wittmann, L Vasiljeva - Nature Reviews Molecular Cell …, 2016 - nature.com
The RNA exosome complex is the most versatile RNA-degradation machine in eukaryotes.
The exosome has a central role in several aspects of RNA biogenesis, including RNA …

[HTML][HTML] The human nuclear exosome targeting complex is loaded onto newly synthesized RNA to direct early ribonucleolysis

M Lubas, PR Andersen, A Schein, A Dziembowski… - Cell reports, 2015 - cell.com
The RNA exosome complex constitutes the major nuclear eukaryotic 3′-5′ exonuclease.
Outside of nucleoli, the human nucleoplasmic exosome is directed to some of its substrates …

[PDF][PDF] Nontemplated nucleotide additions distinguish the small RNA composition in cells from exosomes

D Koppers-Lalic, M Hackenberg, IV Bijnsdorp… - Cell reports, 2014 - cell.com
Functional biomolecules, including small noncoding RNAs (ncRNAs), are released and
transmitted between mammalian cells via extracellular vesicles (EVs), including endosome …

Super-lncRNAs: identification of lncRNAs that target super-enhancers via RNA: DNA: DNA triplex formation

B Soibam - Rna, 2017 - rnajournal.cshlp.org
Super-enhancers are characterized by high levels of Mediator binding and are major
contributors to the expression of their associated genes. They exhibit high levels of local …

[HTML][HTML] Extracellular vesicle associated long non-coding RNAs functionally enhance cell viability

C Hewson, D Capraro, J Burdach, N Whitaker… - Non-coding RNA …, 2016 - Elsevier
Cells communicate with one another to create microenvironments and share resources. One
avenue by which cells communicate is through the action of exosomes. Exosomes are …

Noncoding RNA transcription targets AID to divergently transcribed loci in B cells

E Pefanis, J Wang, G Rothschild, J Lim, J Chao… - Nature, 2014 - nature.com
The vast majority of the mammalian genome has the potential to express noncoding RNA
(ncRNA). The 11-subunit RNA exosome complex is the main source of cellular 3′–5 …

The RNA exosome promotes transcription termination of backtracked RNA polymerase II

JF Lemay, M Larochelle, S Marguerat… - Nature structural & …, 2014 - nature.com
The exosome is an RNA-decay complex that constantly monitors transcription and
contributes to post-transcriptional turnover of faulty mRNAs. Yet how nuclear RNA …