[HTML][HTML] gprofiler2--an R package for gene list functional enrichment analysis and namespace conversion toolset g: Profiler

L Kolberg, U Raudvere, I Kuzmin, J Vilo… - …, 2020 - ncbi.nlm.nih.gov
Abstract g: Profiler (https://biit. cs. ut. ee/gprofiler) is a widely used gene list functional
profiling and namespace conversion toolset that has been contributing to reproducible …

g: Profiler—interoperable web service for functional enrichment analysis and gene identifier mapping (2023 update)

L Kolberg, U Raudvere, I Kuzmin, P Adler… - Nucleic acids …, 2023 - academic.oup.com
Abstract g: Profiler is a reliable and up-to-date functional enrichment analysis tool that
supports various evidence types, identifier types and organisms. The toolset integrates many …

g: Profiler: a web server for functional enrichment analysis and conversions of gene lists (2019 update)

U Raudvere, L Kolberg, I Kuzmin, T Arak… - Nucleic acids …, 2019 - academic.oup.com
Biological data analysis often deals with lists of genes arising from various studies. The g:
Profiler toolset is widely used for finding biological categories enriched in gene lists …

g: Profiler—a web server for functional interpretation of gene lists (2016 update)

J Reimand, T Arak, P Adler, L Kolberg… - Nucleic acids …, 2016 - academic.oup.com
Functional enrichment analysis is a key step in interpreting gene lists discovered in diverse
high-throughput experiments. g: Profiler studies flat and ranked gene lists and finds …

g: Profiler—a web-based toolset for functional profiling of gene lists from large-scale experiments

J Reimand, M Kull, H Peterson, J Hansen… - Nucleic acids …, 2007 - academic.oup.com
Abstract g: Profiler (http://biit. cs. ut. ee/gprofiler/) is a public web server for characterising
and manipulating gene lists resulting from mining high-throughput genomic data. g: Profiler …

[HTML][HTML] clusterProfiler 4.0: A universal enrichment tool for interpreting omics data

T Wu, E Hu, S Xu, M Chen, P Guo, Z Dai, T Feng… - The innovation, 2021 - cell.com
Functional enrichment analysis is pivotal for interpreting high-throughput omics data in life
science. It is crucial for this type of tool to use the latest annotation databases for as many …

g: Profiler—a web server for functional interpretation of gene lists (2011 update)

J Reimand, T Arak, J Vilo - Nucleic acids research, 2011 - academic.oup.com
Functional interpretation of candidate gene lists is an essential task in modern biomedical
research. Here, we present the 2011 update of g: Profiler (http://biit. cs. ut. ee/gprofiler/), a …

WebGestalt 2017: a more comprehensive, powerful, flexible and interactive gene set enrichment analysis toolkit

J Wang, S Vasaikar, Z Shi, M Greer… - Nucleic acids …, 2017 - academic.oup.com
Functional enrichment analysis has played a key role in the biological interpretation of high-
throughput omics data. As a long-standing and widely used web application for functional …

GeneCodis3: a non-redundant and modular enrichment analysis tool for functional genomics

D Tabas-Madrid, R Nogales-Cadenas… - Nucleic acids …, 2012 - academic.oup.com
Since its first release in 2007, GeneCodis has become a valuable tool to functionally
interpret results from experimental techniques in genomics. This web-based application …

Bioinformatics enrichment tools: paths toward the comprehensive functional analysis of large gene lists

DW Huang, BT Sherman, RA Lempicki - Nucleic acids research, 2009 - academic.oup.com
Functional analysis of large gene lists, derived in most cases from emerging high-throughput
genomic, proteomic and bioinformatics scanning approaches, is still a challenging and …