Development of a genetic toolset for the highly engineerable and metabolically versatile Acinetobacter baylyi ADP1

BW Biggs, SR Bedore, E Arvay, S Huang… - Nucleic Acids …, 2020 - academic.oup.com
One primary objective of synthetic biology is to improve the sustainability of chemical
manufacturing. Naturally occurring biological systems can utilize a variety of carbon sources …

Acinetobacter baylyi ADP1—naturally competent for synthetic biology

S Santala, V Santala - Essays in Biochemistry, 2021 - portlandpress.com
Acinetobacter baylyi ADP1 is a non-pathogenic soil bacterium known for its metabolic
diversity and high natural transformation and recombination efficiency. For these features, A …

Acinetobacter baylyi ADP1: Transforming the choice of model organism

KT Elliott, EL Neidle - IUBMB life, 2011 - Wiley Online Library
For more than 25 years, Acinetobacter baylyi ADP1 has been used in molecular biology
studies that address a broad range of questions. Recently, the rapid accumulation of data …

Rapid and assured genetic engineering methods applied to Acinetobacter baylyi ADP1 genome streamlining

GA Suárez, KR Dugan, BA Renda… - Nucleic Acids …, 2020 - academic.oup.com
One goal of synthetic biology is to improve the efficiency and predictability of living cells by
removing extraneous genes from their genomes. We demonstrate improved methods for …

Characterization of highly ferulate-tolerant Acinetobacter baylyi ADP1 isolates by a rapid reverse engineering method

J Luo, EA McIntyre, SR Bedore, V Santala… - Applied and …, 2022 - Am Soc Microbiol
Adaptive laboratory evolution (ALE) is a powerful approach for improving phenotypes of
microbial hosts. Evolved strains typically contain numerous mutations that can be revealed …

Acinetobacter sp. ADP1: an ideal model organism for genetic analysis and genome engineering

D Metzgar, JM Bacher, V Pezo, J Reader… - Nucleic acids …, 2004 - academic.oup.com
Acinetobacter sp. strain ADP1 is a naturally transformable gram-negative bacterium with
simple culture requirements, a prototrophic metabolism and a compact genome of 3.7 Mb …

Genome instability mediates the loss of key traits by Acinetobacter baylyi ADP1 during laboratory evolution

BA Renda, A Dasgupta, D Leon… - Journal of bacteriology, 2015 - Am Soc Microbiol
Acinetobacter baylyi ADP1 has the potential to be a versatile bacterial host for synthetic
biology because it is naturally transformable. To examine the genetic reliability of this …

Novel metabolic features in Acinetobacter baylyi ADP1 revealed by a multiomics approach

L Stuani, C Lechaplais, AV Salminen, B Ségurens… - Metabolomics, 2014 - Springer
Expansive knowledge of bacterial metabolism has been gained from genome sequencing
output, but the high proportion of genes lacking a proper functional annotation in a given …

Reduced mutation rate and increased transformability of transposon-free Acinetobacter baylyi ADP1-ISx

GA Suárez, BA Renda, A Dasgupta… - Applied and …, 2017 - Am Soc Microbiol
The genomes of most bacteria contain mobile DNA elements that can contribute to
undesirable genetic instability in engineered cells. In particular, transposable insertion …

Acinetobacter baylyi ADP1 as a model for metabolic system biology

V de Berardinis, M Durot, J Weissenbach… - Current opinion in …, 2009 - Elsevier
Information produced by the annotation of an 'average bacterial genome'can be separated
into three parts. One-third represents what we know, another third what we think we know …