Replication stalling at unstable inverted repeats: interplay between DNA hairpins and fork stabilizing proteins

I Voineagu, V Narayanan… - Proceedings of the …, 2008 - National Acad Sciences
DNA inverted repeats (IRs) are hotspots of genomic instability in both prokaryotes and
eukaryotes. This feature is commonly attributed to their ability to fold into hairpin-or cruciform …

Mechanisms of replication fork protection: a safeguard for genome stability

A Errico, V Costanzo - Critical reviews in biochemistry and …, 2012 - Taylor & Francis
During S-phase, the genome is extremely vulnerable and the progression of replication forks
is often threatened by exogenous and endogenous challenges. When replication fork …

Replication fork barriers: pausing for a break or stalling for time?

K Labib, B Hodgson - EMBO reports, 2007 - embopress.org
Defects in chromosome replication can lead to translocations that are thought to result from
recombination events at stalled DNA replication forks. The progression of forks is controlled …

Replication fork stalling at natural impediments

EV Mirkin, SM Mirkin - Microbiology and molecular biology …, 2007 - Am Soc Microbiol
Accurate and complete replication of the genome in every cell division is a prerequisite of
genomic stability. Thus, both prokaryotic and eukaryotic replication forks are extremely …

Overcoming natural replication barriers: differential helicase requirements

RP Anand, KA Shah, H Niu, P Sung… - Nucleic acids …, 2012 - academic.oup.com
DNA sequences that form secondary structures or bind protein complexes are known
barriers to replication and potential inducers of genome instability. In order to determine …

Replication fork reversal and the maintenance of genome stability

J Atkinson, P McGlynn - Nucleic acids research, 2009 - academic.oup.com
The progress of replication forks is often threatened in vivo, both by DNA damage and by
proteins bound to the template. Blocked forks must somehow be restarted, and the original …

Replication fork dynamics and dynamic mutations: the fork-shift model of repeat instability

JD Cleary, CE Pearson - TRENDS in Genetics, 2005 - cell.com
Gene-specific repeat instability is responsible for> 36 human diseases. Active instability
varies in a tissue-, developmental stage-and locus-specific manner and occurs in both …

Fork rotation and DNA precatenation are restricted during DNA replication to prevent chromosomal instability

SA Schalbetter, S Mansoubi… - Proceedings of the …, 2015 - National Acad Sciences
Faithful genome duplication and inheritance require the complete resolution of all
intertwines within the parental DNA duplex. This is achieved by topoisomerase action ahead …

[HTML][HTML] Positive torsional strain causes the formation of a four-way junction at replication forks

L Postow, C Ullsperger, RW Keller… - Journal of Biological …, 2001 - ASBMB
The advance of a DNA replication fork requires an unwinding of the parental double helix.
This in turn creates a positive superhelical stress, a (+)-ΔLk, that must be relaxed by …

Topological challenges to DNA replication: conformations at the fork

L Postow, NJ Crisona, BJ Peter… - Proceedings of the …, 2001 - National Acad Sciences
The unwinding of the parental DNA duplex during replication causes a positive linking
number difference, or superhelical strain, to build up around the elongating replication fork …