miRTarBase 2020: updates to the experimentally validated microRNA–target interaction database

HY Huang, YCD Lin, J Li, KY Huang… - Nucleic acids …, 2020 - academic.oup.com
MicroRNAs (miRNAs) are small non-coding RNAs (typically consisting of 18–25
nucleotides) that negatively control expression of target genes at the post-transcriptional …

miRTarBase: a database curates experimentally validated microRNA–target interactions

SD Hsu, FM Lin, WY Wu, C Liang… - Nucleic acids …, 2011 - academic.oup.com
MicroRNAs (miRNAs), ie small non-coding RNA molecules (∼ 22 nt), can bind to one or
more target sites on a gene transcript to negatively regulate protein expression …

miRTarBase 2016: updates to the experimentally validated miRNA-target interactions database

CH Chou, NW Chang, S Shrestha, SD Hsu… - Nucleic acids …, 2016 - academic.oup.com
MicroRNAs (miRNAs) are small non-coding RNAs of approximately 22 nucleotides, which
negatively regulate the gene expression at the post-transcriptional level. This study …

miRTarBase update 2018: a resource for experimentally validated microRNA-target interactions

CH Chou, S Shrestha, CD Yang… - Nucleic acids …, 2018 - academic.oup.com
MicroRNAs (miRNAs) are small non-coding RNAs of∼ 22 nucleotides that are involved in
negative regulation of mRNA at the post-transcriptional level. Previously, we developed …

miRTarBase update 2022: an informative resource for experimentally validated miRNA–target interactions

HY Huang, YCD Lin, S Cui, Y Huang… - Nucleic acids …, 2022 - academic.oup.com
MicroRNAs (miRNAs) are noncoding RNAs with 18–26 nucleotides; they pair with target
mRNAs to regulate gene expression and produce significant changes in various …

miRTarBase update 2014: an information resource for experimentally validated miRNA-target interactions

SD Hsu, YT Tseng, S Shrestha, YL Lin… - Nucleic acids …, 2014 - academic.oup.com
MicroRNAs (miRNAs) are small non-coding RNA molecules capable of negatively
regulating gene expression to control many cellular mechanisms. The miRTarBase …

miRWalk2. 0: a comprehensive atlas of microRNA-target interactions

H Dweep, N Gretz - Nature methods, 2015 - nature.com
miRWalk2. 0 (http://zmf. umm. uni-heidelberg. de/mirwalk2) is a comprehensive archive,
supplying the largest available collection of predicted and experimentally verified microRNA …

TarBase 6.0: capturing the exponential growth of miRNA targets with experimental support

T Vergoulis, IS Vlachos, P Alexiou… - Nucleic acids …, 2012 - academic.oup.com
As the relevant literature and the number of experiments increase at a super linear rate,
databases that curate and collect experimentally verified microRNA (miRNA) targets have …

DIANA-TarBase v7. 0: indexing more than half a million experimentally supported miRNA: mRNA interactions

IS Vlachos, MD Paraskevopoulou… - Nucleic acids …, 2015 - academic.oup.com
Abstract microRNAs (miRNAs) are short non-coding RNA species, which act as potent gene
expression regulators. Accurate identification of miRNA targets is crucial to understanding …

[HTML][HTML] MicroTar: predicting microRNA targets from RNA duplexes

R Thadani, MT Tammi - BMC bioinformatics, 2006 - Springer
Background The accurate prediction of a comprehensive set of messenger RNAs (targets)
regulated by animal microRNAs (miRNAs) remains an open problem. In particular, the …