BrainSuite: an automated cortical surface identification tool

DW Shattuck, RM Leahy - Medical image analysis, 2002 - Elsevier
We describe a new magnetic resonance (MR) image analysis tool that produces cortical
surface representations with spherical topology from MR images of the human brain. The …

Structural MR image processing using the BRAINS2 toolbox

VA Magnotta, G Harris, NC Andreasen… - … Medical Imaging and …, 2002 - Elsevier
Medical imaging has opened a new door into biomedical research. In order to study various
diseases of the brain and detect their impact on brain structure, robust and user friendly …

Topology correction in brain cortex segmentation using a multiscale, graph-based algorithm

X Han, C Xu, U Braga-Neto… - IEEE Transactions on …, 2002 - ieeexplore.ieee.org
Reconstructing an accurate and topologically correct representation of the cortical surface of
the brain is an important objective in various neuroscience applications. Most cortical …

An efficient algorithm for topologically correct segmentation of the cortical sheet in anatomical MR volumes

N Kriegeskorte, R Goebel - Neuroimage, 2001 - Elsevier
Polygon-mesh representations of the cortices of individual subjects are of anatomical
interest, aid visualization of functional imaging data and provide important constraints for …

Automatic labelling of the human cortical surface using sulcal basins

G Lohmann, DY Von Cramon - Medical image analysis, 2000 - Elsevier
Human brain mapping aims at establishing correspondences between brain function and
brain anatomy. One of the most intriguing problems in this field is the high interpersonal …

Automated graph-based analysis and correction of cortical volume topology

DW Shattuck, RM Leahy - IEEE transactions on medical …, 2001 - ieeexplore.ieee.org
The human cerebral cortex is topologically equivalent to a sheet and can be considered
topologically spherical if it is closed at the brainstem. Low-level segmentation of magnetic …

CRUISE: cortical reconstruction using implicit surface evolution

X Han, DL Pham, D Tosun, ME Rettmann, C Xu… - NeuroImage, 2004 - Elsevier
Segmentation and representation of the human cerebral cortex from magnetic resonance
(MR) images play an important role in neuroscience and medicine. A successful …

Brain segmentation and the generation of cortical surfaces

M Joshi, J Cui, K Doolittle, S Joshi, D Van Essen… - NeuroImage, 1999 - Elsevier
This paper describes methods for white matter segmentation in brain images and the
generation of cortical surfaces from the segmentations. We have developed a system that …

Reconstruction of the human cerebral cortex from magnetic resonance images

C Xu, DL Pham, ME Rettmann, DN Yu… - IEEE Transactions on …, 1999 - ieeexplore.ieee.org
Reconstructing the geometry of the human cerebral cortex from MR images is an important
step in both brain mapping and surgical path planning applications. Difficulties with imaging …

Cortical surface-based analysis: I. Segmentation and surface reconstruction

AM Dale, B Fischl, MI Sereno - Neuroimage, 1999 - Elsevier
Several properties of the cerebral cortex, including its columnar and laminar organization, as
well as the topographic organization of cortical areas, can only be properly understood in …