Transient noise amplification and gene expression synchronization in a bistable mammalian cell-fate switch
S Palani, CA Sarkar - Cell reports, 2012 - cell.com
Progenitor cells within a clonal population show variable proclivity toward lineage
commitment and differentiation. This cell-to-cell variability has been attributed to …
commitment and differentiation. This cell-to-cell variability has been attributed to …
Noise-driven stem cell and progenitor population dynamics
Background The balance between maintenance of the stem cell state and terminal
differentiation is influenced by the cellular environment. The switching between these states …
differentiation is influenced by the cellular environment. The switching between these states …
Gene expression noise dynamics unveil functional heterogeneity of ageing hematopoietic stem cells
RE Rosales-Alvarez, J Rettkowski, JS Herman… - bioRxiv, 2022 - biorxiv.org
Variability of gene expression due to stochasticity of transcription or variation of extrinsic
signals, termed biological noise, is a potential driving force of cellular differentiation. While …
signals, termed biological noise, is a potential driving force of cellular differentiation. While …
Oscillatory protein expression dynamics endows stem cells with robust differentiation potential
N Suzuki, C Furusawa, K Kaneko - PloS one, 2011 - journals.plos.org
The lack of understanding of stem cell differentiation and proliferation is a fundamental
problem in developmental biology. Although gene regulatory networks (GRNs) for stem cell …
problem in developmental biology. Although gene regulatory networks (GRNs) for stem cell …
Integrating extrinsic and intrinsic cues into a minimal model of lineage commitment for hematopoietic progenitors
S Palani, CA Sarkar - PLoS computational biology, 2009 - journals.plos.org
Autoregulation of transcription factors and cross-antagonism between lineage-specific
transcription factors are a recurrent theme in cell differentiation. An equally prevalent event …
transcription factors are a recurrent theme in cell differentiation. An equally prevalent event …
Toggle switch: noise determines the winning gene
J Jaruszewicz, T Lipniacki - Physical biology, 2013 - iopscience.iop.org
Bistable regulatory elements enhance heterogeneity in cell populations and, in multicellular
organisms, allow cells to specialize and specify their fate. Our study demonstrates that in a …
organisms, allow cells to specialize and specify their fate. Our study demonstrates that in a …
Dynamic heterogeneity and DNA methylation in embryonic stem cells
Cell populations can be strikingly heterogeneous, composed of multiple cellular states, each
exhibiting stochastic noise in its gene expression. A major challenge is to disentangle these …
exhibiting stochastic noise in its gene expression. A major challenge is to disentangle these …
Order by chance: origins and benefits of stochasticity in immune cell fate control
To protect against diverse challenges, the immune system must continuously generate an
arsenal of specialized cell types, each of which can mount a myriad of effector responses …
arsenal of specialized cell types, each of which can mount a myriad of effector responses …
Single-cell-based analysis highlights a surge in cell-to-cell molecular variability preceding irreversible commitment in a differentiation process
A Richard, L Boullu, U Herbach, A Bonnafoux… - PLoS …, 2016 - journals.plos.org
In some recent studies, a view emerged that stochastic dynamics governing the switching of
cells from one differentiation state to another could be characterized by a peak in gene …
cells from one differentiation state to another could be characterized by a peak in gene …
Computational modeling of the hematopoietic erythroid-myeloid switch reveals insights into cooperativity, priming, and irreversibility
V Chickarmane, T Enver… - PLoS computational …, 2009 - journals.plos.org
Hematopoietic stem cell lineage choices are decided by genetic networks that are turned
ON/OFF in a switch-like manner. However, prior to lineage commitment, genes are primed at …
ON/OFF in a switch-like manner. However, prior to lineage commitment, genes are primed at …