Diversity, expansion, and evolutionary novelty of plant DNA-binding transcription factor families
Plant transcription factors (TFs) that interact with specific sequences via DNA-binding
domains are crucial for regulating transcriptional initiation and are fundamental to plant …
domains are crucial for regulating transcriptional initiation and are fundamental to plant …
Transcription factor families have much higher expansion rates in plants than in animals
Transcription factors (TFs), which are central to the regulation of gene expression, are
usually members of multigene families. In plants, they are involved in diverse processes …
usually members of multigene families. In plants, they are involved in diverse processes …
Cross-family transcription factor interactions: an additional layer of gene regulation
Specific and dynamic gene expression strongly depends on transcription factor (TF) activity
and most plant TFs function in a combinatorial fashion. They can bind to DNA and control …
and most plant TFs function in a combinatorial fashion. They can bind to DNA and control …
DNA-binding specificities of plant transcription factors and their potential to define target genes
JM Franco-Zorrilla, I López-Vidriero… - Proceedings of the …, 2014 - National Acad Sciences
Transcription factors (TFs) regulate gene expression through binding to cis-regulatory
specific sequences in the promoters of their target genes. In contrast to the genetic code, the …
specific sequences in the promoters of their target genes. In contrast to the genetic code, the …
Identification of plant transcription factor target sequences
JM Franco-Zorrilla, R Solano - Biochimica et Biophysica Acta (BBA)-Gene …, 2017 - Elsevier
Regulation of gene expression depends on specific cis-regulatory sequences located in the
gene promoter regions. These DNA sequences are recognized by transcription factors (TFs) …
gene promoter regions. These DNA sequences are recognized by transcription factors (TFs) …
Transcription factor families in Arabidopsis: major progress and outstanding issues for future research
LJ Qu, YX Zhu - Current Opinion in Plant Biology, 2006 - Elsevier
Transcription factors (TFs) are a group of proteins that control cellular processes by
regulating the expression of downstream target genes. Recent progress has been made in …
regulating the expression of downstream target genes. Recent progress has been made in …
Plant-TFClass: a structural classification for plant transcription factors
Transcription factors (TFs) bind DNA at specific sequences to regulate gene expression.
This universal process is achieved via their DNA-binding domain (DBD). In mammals, the …
This universal process is achieved via their DNA-binding domain (DBD). In mammals, the …
A Functional and Evolutionary Perspective on Transcription Factor Binding in Arabidopsis thaliana
Understanding the mechanisms underlying gene regulation is paramount to comprehend
the translation from genotype to phenotype. The two are connected by gene expression, and …
the translation from genotype to phenotype. The two are connected by gene expression, and …
PlantTFDB 3.0: a portal for the functional and evolutionary study of plant transcription factors
With the aim to provide a resource for functional and evolutionary study of plant transcription
factors (TFs), we updated the plant TF database PlantTFDB to version 3.0 (http://planttfdb …
factors (TFs), we updated the plant TF database PlantTFDB to version 3.0 (http://planttfdb …
PlantTFDB 4.0: toward a central hub for transcription factors and regulatory interactions in plants
With the goal of providing a comprehensive, high-quality resource for both plant transcription
factors (TFs) and their regulatory interactions with target genes, we upgraded plant TF …
factors (TFs) and their regulatory interactions with target genes, we upgraded plant TF …