Biosynthesis and function of modified bases in bacteria and their viruses

P Weigele, EA Raleigh - Chemical reviews, 2016 - ACS Publications
Naturally occurring modification of the canonical A, G, C, and T bases can be found in the
DNA of cellular organisms and viruses from all domains of life. Bacterial viruses …

Hypermodified DNA in Viruses of E. coli and Salmonella

G Hutinet, YJ Lee, V de Crécy-Lagard, PR Weigele - EcoSal Plus, 2021 - Am Soc Microbiol
The DNA in bacterial viruses collectively contains a rich, yet relatively underexplored,
chemical diversity of nucleobases beyond the canonical adenine, guanine, cytosine, and …

Chemical methods for decoding cytosine modifications in DNA

MJ Booth, EA Raiber, S Balasubramanian - Chemical reviews, 2015 - ACS Publications
Genetic information is encoded by the four bases adenine (A), guanine (G), cytosine (C),
and thymine (T). Base pairing through hydrogen bonding between the cognate pairs AT and …

[引用][C] Modified bases in bacteriophage DNAs

RAJ Warren - Annual Reviews in Microbiology, 1980 - annualreviews.org
The first modified base in a bacteriophage DNA, 5-hydroxymethylcytoн sine (hmCyt), was
discovered 27 years ago (154). It played a crucial role in the development of the …

Identification and biosynthesis of thymidine hypermodifications in the genomic DNA of widespread bacterial viruses

YJ Lee, N Dai, SE Walsh, S Müller… - Proceedings of the …, 2018 - National Acad Sciences
Certain viruses of bacteria (bacteriophages) enzymatically hypermodify their DNA to protect
their genetic material from host restriction endonuclease-mediated cleavage. Historically, it …

7-Deazaguanine modifications protect phage DNA from host restriction systems

G Hutinet, W Kot, L Cui, R Hillebrand… - Nature …, 2019 - nature.com
Genome modifications are central components of the continuous arms race between viruses
and their hosts. The archaeosine base (G+), which was thought to be found only in archaeal …

Mapping and elucidating the function of modified bases in DNA

EA Raiber, R Hardisty, P van Delft… - Nature Reviews …, 2017 - nature.com
Chemically modified bases exist naturally in genomic DNA. Research into these bases has
been invigorated by the discovery of several modified bases in the mammalian genome, in …

Computational identification of novel biochemical systems involved in oxidation, glycosylation and other complex modifications of bases in DNA

LM Iyer, D Zhang, A Maxwell Burroughs… - Nucleic acids …, 2013 - academic.oup.com
Discovery of the TET/JBP family of dioxygenases that modify bases in DNA has sparked
considerable interest in novel DNA base modifications and their biological roles. Using …

[HTML][HTML] Natural, modified DNA bases

MK Bilyard, S Becker, S Balasubramanian - Current Opinion in Chemical …, 2020 - Elsevier
The four canonical bases that make up genomic DNA are subject to a variety of chemical
modifications in living systems. Recent years have witnessed the discovery of various new …

[HTML][HTML] Nucleic acids are not boring long polymers of only four types of nucleotides: a guided tour

H Grosjean - Madame Curie Bioscience Database [Internet], 2013 - ncbi.nlm.nih.gov
Chemically altered nucleosides derived from canonical ribo-or deoxyribonucleoside-
derivatives of adenosine, cytosine, guanosine, and uridine or thymidine are found in all …