Comparative Analysis of Codon Usage Patterns in Nuclear and Chloroplast Genome of Dalbergia (Fabaceae)

ZK Wang, Y Liu, HY Zheng, MQ Tang, SQ Xie - Genes, 2023 - mdpi.com
The Dalbergia plants are widely distributed across more than 130 tropical and subtropical
countries and have significant economic and medicinal value. Codon usage bias (CUB) is a …

Comparative analysis of codon usage patterns in chloroplast genomes of the Asteraceae family

X Nie, P Deng, K Feng, P Liu, X Du, FM You… - Plant molecular biology …, 2014 - Springer
Codon usage bias (CUB) is an important evolutionary feature in a genome and has been
widely documented from prokaryotes to eukaryotes. However, the significance of CUB in the …

Codon usage profiling of chloroplast genome in Juglandaceae

Y Zeng, L Shen, S Chen, S Qu, N Hou - Forests, 2023 - mdpi.com
Juglandaceae (walnut) is made up of several economically and ecologically valuable tree
species. Chloroplasts, vitally important for plant growth, are also a rich source of genetic and …

Comparative analysis of codon bias in the chloroplast genomes of theaceae species

Z Wang, Q Cai, Y Wang, M Li, C Wang, Z Wang… - Frontiers in …, 2022 - frontiersin.org
Theaceae species are dicotyledonous angiosperms with extremely high ornamental and
economic value. The chloroplast genome is traditionally used to study species evolution …

[HTML][HTML] Codon usage bias in the chloroplast genomes of Cymbidium species in Guizhou, China

A Rao, Z Chen, D Wu, Y Wang, N Hou - South African Journal of Botany, 2024 - Elsevier
Cymbidium plants play a vital role in biodiversity conservation, evolutionary research, and
biological protection. Understanding codon usage bias (CUB) in Cymbidium plants is crucial …

Analysis of chloroplast genome characteristics and codon usage bias in 14 species of Annonaceae

X Hu, Y Li, F Meng, Y Duan, M Sun, S Yang… - Functional & Integrative …, 2024 - Springer
For the study of species evolution, chloroplast gene expression, and transformation, the
chloroplast genome is an invaluable resource. Codon usage bias (CUB) analysis is a tool …

Codon usage bias and genetic diversity in chloroplast genomes of Elaeagnus species (Myrtiflorae: Elaeagnaceae)

C Li, L Zhou, J Nie, S Wu, W Li, Y Liu, Y Liu - Physiology and Molecular …, 2023 - Springer
Codon usage bias (CUB) reveals the characteristics of species and can be utilized to
understand their evolutionary relationship, increase the target genes' expression in the …

Codon usage bias in chloroplast genes implicate adaptive evolution of four ginger species

Q Yang, C Xin, QS Xiao, YT Lin, L Li… - Frontiers in Plant …, 2023 - frontiersin.org
Codon usage bias (CUB) refers to different codons exhibiting varying frequencies of usage
in the genome. Studying CUB is crucial for understanding genome structure, function, and …

[HTML][HTML] Analysis of codon usage patterns in Bupleurum falcatum chloroplast genome

M Gao, X Huo, L Lu, M Liu, G Zhang - Chinese Herbal Medicines, 2023 - Elsevier
Objective In order to distinguish the traditional Chinese medicine Bupleurum falcatum and
its adulterants effectively and develop a better understanding of the factors affecting …

Analysis of codon usage in the chloroplast genome of Broomcorn millet (Panicum miliaceum L.).

LH Liu Hui, WMX Wang MengXing, YWJ Yue WenJie… - 2017 - cabidigitallibrary.org
Codon usage bias (CUB) is an important evolutionary feature in a genome, which provides
important information for studying organism evolution, gene function, and exogenous gene …