[HTML][HTML] DeamiDATE 1.0: Site-specific deamidation as a tool to assess authenticity of members of ancient proteomes

A Ramsøe, V van Heekeren, P Ponce, R Fischer… - Journal of …, 2020 - Elsevier
Contamination is a potential problem in the study of ancient proteins, either from prior
handling of the sample, laboratory consumables, or cross-sample carryover from mass …

[HTML][HTML] Trends in deamidation across archaeological bones, ceramics and dental calculus

MP Chowdhury, M Buckley - Methods, 2022 - Elsevier
The accumulation of post-translational modifications (PTMs) in proteins throughout the
lifecycle has been studied for decades, particularly more so with the advent of soft-ionization …

Site‐specific deamidation of glutamine: a new marker of bone collagen deterioration

NL Van Doorn, J Wilson, H Hollund… - … in mass spectrometry, 2012 - Wiley Online Library
RATIONALE Non‐enzymatic deamidation accumulates in aging tissues in vivo and has
been proposed to be potentially useful as a molecular clock. The process continues post …

Glutamine deamidation: an indicator of antiquity, or preservational quality?

ER Schroeter, TP Cleland - Rapid communications in mass …, 2016 - Wiley Online Library
Rationale Much credence has been given in the paleoproteomic community to glutamine
deamidation as a proxy for the age of proteins derived from fossil and subfossil material, and …

Assessing the degradation of ancient milk proteins through site-specific deamidation patterns

A Ramsøe, M Crispin, M Mackie, K McGrath… - Scientific reports, 2021 - nature.com
The origins, prevalence and nature of dairying have been long debated by archaeologists.
Within the last decade, new advances in high-resolution mass spectrometry have allowed …

Minimizing laboratory-induced decay in bone proteomics

N Procopio, M Buckley - Journal of Proteome Research, 2017 - ACS Publications
Proteomics methods are being increasingly used to study archaeological and
palaeontological bone, assisting in species identification and phylogenetic studies as well …

[HTML][HTML] Examining collagen preservation through glutamine deamidation at Denisova Cave

S Brown, M Kozlikin, M Shunkov, A Derevianko… - Journal of …, 2021 - Elsevier
The use of glutamine deamidation has been controversially proposed as a means of
measuring relative decay in archeological bones using peptide mass fingerprinting data. If …

Collagen deamidation in archaeological bone as an assessment for relative decay rates

M Pal Chowdhury, R Wogelius, PL Manning… - …, 2019 - Wiley Online Library
Attempts to extend methods for dating archaeological bones beyond that of radiocarbon
dating, such as amino acid racemization, have met with limited success owing to the …

Modeling deamidation in sheep α-keratin peptides and application to archeological wool textiles

C Solazzo, J Wilson, JM Dyer, S Clerens… - Analytical …, 2014 - ACS Publications
Deamidation of glutamine (Q) and asparagine (N) has been recognized as a marker of
degradation and aging in ancient proteins. Using matrix-assisted laser desorption/ionization …

Variations in glutamine deamidation for a Châtelperronian bone assemblage as measured by peptide mass fingerprinting of collagen

F Welker, MA Soressi, M Roussel… - STAR: Science & …, 2017 - Taylor & Francis
Peptide mass fingerprinting of bone collagen (ZooMS) has previously been proposed as a
method to calculate the extent of the non-enzymatic degradation of glutamine into glutamic …