Functional consequences of bidirectional promoters

W Wei, V Pelechano, AI Järvelin, LM Steinmetz - Trends in Genetics, 2011 - cell.com
Several studies have shown that promoters of protein-coding genes are origins of pervasive
non-coding RNA transcription and can initiate transcription in both directions. However, only …

Noncoding transcription at enhancers: general principles and functional models

G Natoli, JC Andrau - Annual review of genetics, 2012 - annualreviews.org
Mammalian genomes are extensively transcribed outside the borders of protein-coding
genes. Genome-wide studies recently demonstrated that cis-regulatory genomic elements …

[图书][B] Gene transcription: mechanisms and control

RJ White - 2009 - books.google.com
Transcription is the focus of much cutting-edge research, as befits its essential place in
biology. The established link between defects in gene transcription and many human …

[HTML][HTML] Repression of divergent noncoding transcription by a sequence-specific transcription factor

ACK Wu, H Patel, M Chia, F Moretto, D Frith… - Molecular cell, 2018 - cell.com
Many active eukaryotic gene promoters exhibit divergent noncoding transcription, but the
mechanisms restricting expression of these transcripts are not well understood. Here, we …

The evolution of transcriptional regulation in eukaryotes

GA Wray, MW Hahn, E Abouheif… - Molecular biology …, 2003 - academic.oup.com
Gene expression is central to the genotype-phenotype relationship in all organisms, and it is
an important component of the genetic basis for evolutionary change in diverse aspects of …

Core promoters: active contributors to combinatorial gene regulation

ST Smale - Genes & development, 2001 - genesdev.cshlp.org
In metazoans, thousands of protein-coding genes must be differentially expressed in specific
cell types, during development, and in response to a wide variety of extracellular signals …

The dual lives of bidirectional promoters

C Wakano, JS Byun, LJ Di, K Gardner - Biochimica et Biophysica Acta (BBA …, 2012 - Elsevier
The sequencing of the human genome led to many insights into gene organization and
structure. One interesting observation was the high frequency of bidirectional promoters …

The evolution of RNAs with multiple functions

ME Dinger, DK Gascoigne, JS Mattick - Biochimie, 2011 - Elsevier
Increasing numbers of transcripts have been reported to transmit both protein-coding and
regulatory information. Apart from challenging our conception of the gene, this observation …

[HTML][HTML] Diversity of core promoter elements comprising human bidirectional promoters

MQ Yang, LL Elnitski - BMC genomics, 2008 - Springer
Background Bidirectional promoters lie between adjacent genes, which are transcribed from
opposite strands of DNA. The functional mechanisms underlying the activation of …

[HTML][HTML] Divergent transcription: a driving force for new gene origination?

X Wu, PA Sharp - Cell, 2013 - cell.com
The mammalian genome is extensively transcribed, a large fraction of which is divergent
transcription from promoters and enhancers that is tightly coupled with active gene …