The structure and physical properties of a packaged bacteriophage particle
A string of nucleotides confined within a protein capsid contains all the instructions
necessary to make a functional virus particle, a virion. Although the structure of the protein …
necessary to make a functional virus particle, a virion. Although the structure of the protein …
An unexpected twist in viral capsid maturation
Lambda-like double-stranded (ds) DNA bacteriophage undergo massive conformational
changes in their capsid shell during the packaging of their viral genomes. Capsid shells are …
changes in their capsid shell during the packaging of their viral genomes. Capsid shells are …
Virus maturation involving large subunit rotations and local refolding
Large-scale conformational changes transform viral precursors into infectious virions. The
structure of bacteriophage HK97 capsid, Head-II, was recently solved by crystallography …
structure of bacteriophage HK97 capsid, Head-II, was recently solved by crystallography …
MS2 bacteriophage capsid studied using all-atom molecular dynamics
VS Farafonov, D Nerukh - Interface Focus, 2019 - royalsocietypublishing.org
The all-atom model of an MS2 bacteriophage particle without its genome (the capsid) was
built using high-resolution cryo-electron microscopy (EM) measurements for initial …
built using high-resolution cryo-electron microscopy (EM) measurements for initial …
Structure of epsilon15 bacteriophage reveals genome organization and DNA packaging/injection apparatus
The critical viral components for packaging DNA, recognizing and binding to host cells, and
injecting the condensed DNA into the host are organized at a single vertex of many …
injecting the condensed DNA into the host are organized at a single vertex of many …
Principles for enhancing virus capsid capacity and stability from a thermophilic virus capsid structure
NP Stone, G Demo, E Agnello, BA Kelch - Nature communications, 2019 - nature.com
The capsids of double-stranded DNA viruses protect the viral genome from the harsh
extracellular environment, while maintaining stability against the high internal pressure of …
extracellular environment, while maintaining stability against the high internal pressure of …
All-atom molecular dynamics calculation study of entire poliovirus empty capsids in solution
Small viruses that belong, for example, to the Picornaviridae, such as poliovirus and foot-
and-mouth disease virus, consist simply of capsid proteins and a single-stranded RNA …
and-mouth disease virus, consist simply of capsid proteins and a single-stranded RNA …
Structural and thermodynamic principles of viral packaging
Packaging of genetic material inside a capsid is one of the major processes in the lifecycle
of bacteriophages. To establish the basic principles of packing double-stranded DNA into a …
of bacteriophages. To establish the basic principles of packing double-stranded DNA into a …
Complete virus capsid at all-atom resolution: Simulations using molecular dynamics and hybrid molecular dynamics/hydrodynamics methods reveal semipermeable …
Simulations of complete virus capsid at atomistic details have been performed using
standard molecular dynamics as well as original hybrid molecular dynamics/hydrodynamics …
standard molecular dynamics as well as original hybrid molecular dynamics/hydrodynamics …
Nucleic acid packaging in viruses
Viruses protect their genetic information by enclosing the viral nucleic acid inside a protein
shell (capsid), in a process known as genome packaging. Viruses follow essentially two …
shell (capsid), in a process known as genome packaging. Viruses follow essentially two …