Using phecodes for research with the electronic health record: from PheWAS to PheRS
L Bastarache - Annual review of biomedical data science, 2021 - annualreviews.org
Electronic health records (EHRs) are a rich source of data for researchers, but extracting
meaningful information out of this highly complex data source is challenging. Phecodes …
meaningful information out of this highly complex data source is challenging. Phecodes …
UK phenomics platform for developing and validating electronic health record phenotypes: CALIBER
S Denaxas, A Gonzalez-Izquierdo… - Journal of the …, 2019 - academic.oup.com
Abstract Objective Electronic health records (EHRs) are a rich source of information on
human diseases, but the information is variably structured, fragmented, curated using …
human diseases, but the information is variably structured, fragmented, curated using …
Evaluating phecodes, clinical classification software, and ICD-9-CM codes for phenome-wide association studies in the electronic health record
Objective To compare three groupings of Electronic Health Record (EHR) billing codes for
their ability to represent clinically meaningful phenotypes and to replicate known genetic …
their ability to represent clinically meaningful phenotypes and to replicate known genetic …
Extracting research-quality phenotypes from electronic health records to support precision medicine
The convergence of two rapidly developing technologies-high-throughput genotyping and
electronic health records (EHRs)-gives scientists an unprecedented opportunity to utilize …
electronic health records (EHRs)-gives scientists an unprecedented opportunity to utilize …
Mining electronic health records: towards better research applications and clinical care
Clinical data describing the phenotypes and treatment of patients represents an underused
data source that has much greater research potential than is currently realized. Mining of …
data source that has much greater research potential than is currently realized. Mining of …
Systematic comparison of phenome-wide association study of electronic medical record data and genome-wide association study data
Candidate gene and genome-wide association studies (GWAS) have identified genetic
variants that modulate risk for human disease; many of these associations require further …
variants that modulate risk for human disease; many of these associations require further …
Chapter 13: Mining electronic health records in the genomics era
JC Denny - PLoS computational biology, 2012 - journals.plos.org
The combination of improved genomic analysis methods, decreasing genotyping costs, and
increasing computing resources has led to an explosion of clinical genomic knowledge in …
increasing computing resources has led to an explosion of clinical genomic knowledge in …
Using electronic health records to generate phenotypes for research
SA Pendergrass, DC Crawford - Current protocols in human …, 2019 - Wiley Online Library
Electronic health records contain patient‐level data collected during and for clinical care.
Data within the electronic health record include diagnostic billing codes, procedure codes …
Data within the electronic health record include diagnostic billing codes, procedure codes …
Phenome-wide association studies as a tool to advance precision medicine
JC Denny, L Bastarache… - Annual review of genomics …, 2016 - annualreviews.org
Beginning in the early 2000s, the accumulation of biospecimens linked to electronic health
records (EHRs) made possible genome-phenome studies (ie, comparative analyses of …
records (EHRs) made possible genome-phenome studies (ie, comparative analyses of …
The electronic medical records and genomics (eMERGE) network: past, present, and future
Abstract The Electronic Medical Records and Genomics Network is a National Human
Genome Research Institute–funded consortium engaged in the development of methods …
Genome Research Institute–funded consortium engaged in the development of methods …