[HTML][HTML] Divergence of two cultivated allotetraploid cottons unveiled by single-molecule long-read expression sequencing

Y Hu, J Chen, L Fang, F Dai, G Mei, Q Wang, T Zhang - Crop Design, 2022 - Elsevier
Allotetraploid Gossypium hirsutum and G. barbadense are two major cultivated cotton
species that have different fiber traits. Research into the molecular basis of those differences …

Subgenome Bias and Temporal Postponement of Gene Expression Contributes to the Distinctions of Fiber Quality in Gossypium Species

H Mei, B Qi, Z Han, T Zhao, M Guo, J Han… - Frontiers in Plant …, 2021 - frontiersin.org
As two cultivated widely allotetraploid cotton species, although Gossypium hirsutum and
Gossypium barbadense evolved from the same ancestor, they differ in fiber quality; the …

Sequencing of allotetraploid cotton (Gossypium hirsutum L. acc. TM-1) provides a resource for fiber improvement

T Zhang, Y Hu, W Jiang, L Fang, X Guan, J Chen… - Nature …, 2015 - nature.com
Upland cotton is a model for polyploid crop domestication and transgenic improvement.
Here we sequenced the allotetraploid Gossypium hirsutum L. acc. TM-1 genome by …

Toward allotetraploid cotton genome assembly: integration of a high-density molecular genetic linkage map with DNA sequence information

L Zhao, L Yuanda, C Caiping, T Xiangchao… - BMC genomics, 2012 - Springer
Background Cotton is the world's most important natural textile fiber and a significant oilseed
crop. Decoding cotton genomes will provide the ultimate reference and resource for …

The Li2 Mutation Results in Reduced Subgenome Expression Bias in Elongating Fibers of Allotetraploid Cotton (Gossypium hirsutum L.)

M Naoumkina, G Thyssen, DD Fang, DJ Hinchliffe… - PLoS …, 2014 - journals.plos.org
Next generation sequencing (RNA-seq) technology was used to evaluate the effects of the
Ligon lintless-2 (Li2) short fiber mutation on transcriptomes of both subgenomes of …

Gossypium barbadense and Gossypium hirsutum genomes provide insights into the origin and evolution of allotetraploid cotton

Y Hu, J Chen, L Fang, Z Zhang, W Ma, Y Niu, L Ju… - Nature …, 2019 - nature.com
Allotetraploid cotton is an economically important natural-fiber-producing crop worldwide.
After polyploidization, Gossypium hirsutum L. evolved to produce a higher fiber yield and to …

Transcriptome analysis of extant cotton progenitors revealed tetraploidization and identified genome-specific single nucleotide polymorphism in diploid and …

X Guan, G Nah, Q Song, JA Udall, DM Stelly… - BMC research …, 2014 - Springer
Background The most widely cultivated cotton (Gossypium hirsutum L., AD-genome) is
derived from tetraploidization between A-and D-genome species. G. arboreum L.(A …

Resequencing of 243 diploid cotton accessions based on an updated A genome identifies the genetic basis of key agronomic traits

X Du, G Huang, S He, Z Yang, G Sun, X Ma, N Li… - Nature …, 2018 - nature.com
The ancestors of Gossypium arboreum and Gossypium herbaceum provided the A
subgenome for the modern cultivated allotetraploid cotton. Here, we upgraded the G …

Development of Genomic Markers and Mapping Tools for Assembling the Allotetraploid Gossypium hirsutum L. Draft Genome Sequence

AM Hulse-Kemp - 2015 - oaktrust.library.tamu.edu
Cotton (Gossypium spp.) is the largest producer of natural textile fibers. Most worldwide and
domestic cotton fiber production is based on cultivars of G. hirsutum L., an allotetraploid …

Comparative transcriptome analysis of fiber and nonfiber tissues to identify the genes preferentially expressed in fiber development in Gossypium hirsutum

J Yang, L Gao, X Liu, X Zhang, X Wang, Z Wang - Scientific Reports, 2021 - nature.com
Cotton is an important natural fiber crop and economic crop worldwide. The quality of cotton
fiber directly determines the quality of cotton textiles. Identifying cotton fiber development …