Geographical migration and fitness dynamics of Streptococcus pneumoniae
S Belman, N Lefrancq, S Nzenze, S Downs… - Nature, 2024 - nature.com
Streptococcus pneumoniae is a leading cause of pneumonia and meningitis worldwide.
Many different serotypes co-circulate endemically in any one location,. The extent and …
Many different serotypes co-circulate endemically in any one location,. The extent and …
Geographic diversity and temporal trends of antimicrobial resistance in Streptococcus pneumoniae in the United States
AW McCormick, CG Whitney, MM Farley, R Lynfield… - Nature medicine, 2003 - nature.com
Resistance of Streptococcus pneumoniae to antibiotics is increasing throughout the United
States, with substantial variation among geographic regions. We show that patterns of …
States, with substantial variation among geographic regions. We show that patterns of …
Dense genomic sampling identifies highways of pneumococcal recombination
Evasion of clinical interventions by Streptococcus pneumoniae occurs through selection of
non-susceptible genomic variants. We report whole-genome sequencing of 3,085 …
non-susceptible genomic variants. We report whole-genome sequencing of 3,085 …
[PDF][PDF] High levels of recombination among
ES Donkor, CJ Bishop, K Gould, J Hinds… - Streptococcus …, 2011 - core.ac.uk
We carried out multilocus sequence typing (MLST) on 148 pneumococcal carriage isolates
collected from children< 24 months old in the Upper River Division, the Gambia. MLST …
collected from children< 24 months old in the Upper River Division, the Gambia. MLST …
Population genomics of post-vaccine changes in pneumococcal epidemiology
NJ Croucher, JA Finkelstein, SI Pelton, PK Mitchell… - Nature …, 2013 - nature.com
Whole-genome sequencing of 616 asymptomatically carried Streptococcus pneumoniae
isolates was used to study the impact of the 7-valent pneumococcal conjugate vaccine …
isolates was used to study the impact of the 7-valent pneumococcal conjugate vaccine …
Within-host microevolution of Streptococcus pneumoniae is rapid and adaptive during natural colonisation
C Chaguza, M Senghore, E Bojang… - Nature …, 2020 - nature.com
Genomic evolution, transmission and pathogenesis of Streptococcus pneumoniae, an
opportunistic human-adapted pathogen, is driven principally by nasopharyngeal carriage …
opportunistic human-adapted pathogen, is driven principally by nasopharyngeal carriage …
Estimating geographical spread of Streptococcus pneumoniae within Israel using genomic data
Understanding how pathogens spread across geographical space is fundamental for control
measures such as vaccination. Streptococcus pneumoniae (the pneumococcus) is a …
measures such as vaccination. Streptococcus pneumoniae (the pneumococcus) is a …
Estimating between-country migration in pneumococcal populations
Streptococcus pneumoniae (the pneumococcus) is a globally distributed, human obligate
opportunistic bacterial pathogen which, although often carried commensally, is also a …
opportunistic bacterial pathogen which, although often carried commensally, is also a …
High levels of recombination among Streptococcus pneumoniae isolates from the Gambia
We carried out multilocus sequence typing (MLST) on 148 pneumococcal carriage isolates
collected from children< 24 months old in the Upper River Division, the Gambia. MLST …
collected from children< 24 months old in the Upper River Division, the Gambia. MLST …
Widespread sharing of pneumococcal strains in a rural African setting: proximate villages are more likely to share similar strains that are carried at multiple timepoints
M Senghore, C Chaguza, E Bojang… - Microbial …, 2022 - microbiologyresearch.org
The transmission dynamics of Streptococcus pneumoniae in sub-Saharan Africa are poorly
understood due to a lack of adequate epidemiological and genomic data. Here we leverage …
understood due to a lack of adequate epidemiological and genomic data. Here we leverage …