The promise and pitfalls of sequence-based identification of plant-pathogenic fungi and oomycetes
Sequences of selected marker loci have been widely used for the identification of specific
pathogens and the development of sequence-based diagnostic methods. Although such …
pathogens and the development of sequence-based diagnostic methods. Although such …
[HTML][HTML] Genome-Enhanced Detection and Identification (GEDI) of plant pathogens
N Feau, S Beauseigle, MJ Bergeron, GJ Bilodeau… - PeerJ, 2018 - peerj.com
Plant diseases caused by fungi and Oomycetes represent worldwide threats to crops and
forest ecosystems. Effective prevention and appropriate management of emerging diseases …
forest ecosystems. Effective prevention and appropriate management of emerging diseases …
[HTML][HTML] Comparison of Primers for the Detection of Phytophthora (and Other Oomycetes) from Environmental Samples
TI Burgess, D White, SJ Sapsford - Journal of Fungi, 2022 - mdpi.com
Many oomycetes are important plant pathogens that cause devastating diseases in
agricultural fields, orchards, urban areas, and natural ecosystems. Limitations and difficulties …
agricultural fields, orchards, urban areas, and natural ecosystems. Limitations and difficulties …
Pathways to false-positive diagnoses using molecular genetic detection methods; Phytophthora cinnamomi a case study
M Kunadiya, D White, WA Dunstan… - FEMS Microbiology …, 2017 - academic.oup.com
Phytophthora cinnamomi is one of the world's most invasive plant pathogens affecting
ornamental plants, horticultural crops and natural ecosystems. Accurate diagnosis is very …
ornamental plants, horticultural crops and natural ecosystems. Accurate diagnosis is very …
The Phytophthora genome initiative database: informatics and analysis for distributed pathogenomic research
M Waugh, P Hraber, J Weller, Y Wu… - Nucleic Acids …, 2000 - academic.oup.com
Abstract The Phytophthora Genome Initiative (PGI) is a distributed collaboration to study the
genome and evolution of a particularly destructive group of plant pathogenic oomycete, with …
genome and evolution of a particularly destructive group of plant pathogenic oomycete, with …
Phytophthora-ID.org: A Sequence-Based Phytophthora Identification Tool
NJ Grünwald, FN Martin, MM Larsen… - Plant …, 2011 - Am Phytopath Society
Contemporary species identification relies strongly on sequence-based identification, yet
resources for identification of many fungal and oomycete pathogens are rare. We developed …
resources for identification of many fungal and oomycete pathogens are rare. We developed …
A step towards validation of high-throughput sequencing for the identification of plant pathogenic oomycetes
AS Espindola, K Cardwell, FN Martin… - …, 2022 - Am Phytopath Society
The advancement in high-throughput sequencing (HTS) technology allows the detection of
pathogens without the need for isolation or template amplification. Plant regulatory agencies …
pathogens without the need for isolation or template amplification. Plant regulatory agencies …
Efficient multiplex simple sequence repeat genotyping of the oomycete plant pathogen Phytophthora infestans
Genotyping is fundamental to population analysis. To accommodate fast, accurate and cost-
effective genotyping, a one-step multiplex PCR method employing twelve simple sequence …
effective genotyping, a one-step multiplex PCR method employing twelve simple sequence …
Large-Scale Gene Discovery in the Oomycete Phytophthora infestans Reveals Likely Components of Phytopathogenicity Shared with True Fungi
TA Randall, RA Dwyer, E Huitema… - Molecular Plant …, 2005 - Am Phytopath Society
To overview the gene content of the important pathogen Phytophthora infestans, large-scale
cDNA and genomic sequencing was performed. A set of 75,757 high-quality expressed …
cDNA and genomic sequencing was performed. A set of 75,757 high-quality expressed …
New (and used) approaches to the study of fungal pathogenicity
SE Gold, MD García-Pedrajas… - Annual review of …, 2001 - annualreviews.org
▪ Abstract The fungi are the most economically important plant pathogens and continue to be
the focus of extensive research with a wide variety of methodologies. Enhancements in …
the focus of extensive research with a wide variety of methodologies. Enhancements in …