Artificial intelligence and cellular segmentation in tissue microscopy images

MS Durkee, R Abraham, MR Clark, ML Giger - The American journal of …, 2021 - Elsevier
With applications in object detection, image feature extraction, image classification, and
image segmentation, artificial intelligence is facilitating high-throughput analysis of image …

Cell segmentation in histopathological images with deep learning algorithms by utilizing spatial relationships

N Hatipoglu, G Bilgin - Medical & biological engineering & computing, 2017 - Springer
In many computerized methods for cell detection, segmentation, and classification in digital
histopathology that have recently emerged, the task of cell segmentation remains a chief …

Open-source deep-learning software for bioimage segmentation

AM Lucas, PV Ryder, B Li, BA Cimini… - Molecular Biology of …, 2021 - Am Soc Cell Biol
Microscopy images are rich in information about the dynamic relationships among biological
structures. However, extracting this complex information can be challenging, especially …

Micro-Net: A unified model for segmentation of various objects in microscopy images

SEA Raza, L Cheung, M Shaban, S Graham… - Medical image …, 2019 - Elsevier
Object segmentation and structure localization are important steps in automated image
analysis pipelines for microscopy images. We present a convolution neural network (CNN) …

[HTML][HTML] Methods for segmentation and classification of digital microscopy tissue images

QD Vu, S Graham, T Kurc, MNN To… - … in bioengineering and …, 2019 - frontiersin.org
High-resolution microscopy images of tissue specimens provide detailed information about
the morphology of normal and diseased tissue. Image analysis of tissue morphology can …

Deep learning in histopathology: A review

S Banerji, S Mitra - Wiley Interdisciplinary Reviews: Data …, 2022 - Wiley Online Library
Histopathology is diagnosis based on visual examination of tissue sections under a
microscope. With the growing number of digitally scanned tissue slide images, computer …

Deep learning in microscopy image analysis: A survey

F Xing, Y Xie, H Su, F Liu, L Yang - IEEE transactions on neural …, 2017 - ieeexplore.ieee.org
Computerized microscopy image analysis plays an important role in computer aided
diagnosis and prognosis. Machine learning techniques have powered many aspects of …

EVICAN—a balanced dataset for algorithm development in cell and nucleus segmentation

M Schwendy, RE Unger, SH Parekh - Bioinformatics, 2020 - academic.oup.com
Motivation Deep learning use for quantitative image analysis is exponentially increasing.
However, training accurate, widely deployable deep learning algorithms requires a plethora …

Defining the boundaries: challenges and advances in identifying cells in microscopy images

N Gogoberidze, BA Cimini - Current Opinion in Biotechnology, 2024 - Elsevier
Highlights•Adoption of segmentation models driven by user-friendly tools and
documentation.•Advancements in novel architectures are driven by the need for a truly …

Machine learning and computer vision approaches for phenotypic profiling

BT Grys, DS Lo, N Sahin, OZ Kraus, Q Morris… - Journal of Cell …, 2017 - rupress.org
With recent advances in high-throughput, automated microscopy, there has been an
increased demand for effective computational strategies to analyze large-scale, image …