Regulation of transposable elements by DNA modifications

Ö Deniz, JM Frost, MR Branco - Nature Reviews Genetics, 2019 - nature.com
Maintenance of genome stability requires control over the expression of transposable
elements (TEs), whose activity can have substantial deleterious effects on the host …

DNA methylation dynamics at transposable elements in mammals

N Jansz - Essays in Biochemistry, 2019 - portlandpress.com
Transposable elements dominate the mammalian genome, but their contribution to genetic
and epigenetic regulation has been largely overlooked. This was in part due to technical …

DNA methylation enables transposable element-driven genome expansion

W Zhou, G Liang, PL Molloy… - Proceedings of the …, 2020 - National Acad Sciences
Multicellular eukaryotic genomes show enormous differences in size. A substantial part of
this variation is due to the presence of transposable elements (TEs). They contribute …

Response of transposable elements to environmental stressors

IR Miousse, MCG Chalbot, A Lumen… - … Research/Reviews in …, 2015 - Elsevier
Transposable elements (TEs) comprise a group of repetitive sequences that bring positive,
negative, as well as neutral effects to the host organism. Earlier considered as “junk DNA,” …

DNA methylation: shared and divergent features across eukaryotes

RJ Schmitz, ZA Lewis, MG Goll - Trends in Genetics, 2019 - cell.com
Chemical modification of nucleotide bases in DNA provides one mechanism for conveying
information in addition to the genetic code. 5-methylcytosine (5mC) represents the most …

DNA N6-methyladenine in metazoans: functional epigenetic mark or bystander?

GZ Luo, C He - Nature structural & molecular biology, 2017 - nature.com
The DNA-adenine modification N 6-methyladenine (6mA), initially thought to be mainly
restricted to prokaryotes and certain unicellular eukaryotes, has recently been found in …

Bacterial N4-methylcytosine as an epigenetic mark in eukaryotic DNA

F Rodriguez, IA Yushenova, D DiCorpo… - Nature …, 2022 - nature.com
DNA modifications are used to regulate gene expression and defend against invading
genetic elements. In eukaryotes, modifications predominantly involve C5-methylcytosine …

5-Methylcytosine DNA demethylation: more than losing a methyl group

DM Franchini, KM Schmitz… - Annual review of …, 2012 - annualreviews.org
Demethylation of 5-methylcytosine in DNA is integral to the maintenance of an intact
epigenome. The balance between the presence or absence of 5-methylcytosine determines …

TET enzymes, TDG and the dynamics of DNA demethylation

RM Kohli, Y Zhang - Nature, 2013 - nature.com
DNA methylation has a profound impact on genome stability, transcription and development.
Although enzymes that catalyse DNA methylation have been well characterized, those that …

Transposable elements and the epigenetic regulation of the genome

RK Slotkin, R Martienssen - Nature reviews genetics, 2007 - nature.com
Overlapping epigenetic mechanisms have evolved in eukaryotic cells to silence the
expression and mobility of transposable elements (TEs). Owing to their ability to recruit the …