Structure of linkage disequilibrium in plants

SA Flint-Garcia, JM Thornsberry… - Annual review of plant …, 2003 - annualreviews.org
Future advances in plant genomics will make it possible to scan a genome for
polymorphisms associated with qualitative and quantitative traits. Before this potential can …

Linkage disequilibrium, genetic association mapping and gene localization in crop plants

K Sorkheh, LV Malysheva-Otto… - … and Molecular Biology, 2008 - SciELO Brasil
DNA-based molecular markers have been extensively utilized for a variety of studies in both
plant and animal systems. One of the major uses of these markers is the construction of …

Linkage disequilibrium and association studies in higher plants: present status and future prospects

PK Gupta, S Rustgi, PL Kulwal - Plant molecular biology, 2005 - Springer
During the last two decades, DNA-based molecular markers have been extensively utilized
for a variety of studies in both plant and animal systems. One of the major uses of these …

Methods for linkage disequilibrium mapping in crops

I Mackay, W Powell - Trends in plant science, 2007 - cell.com
Linkage disequilibrium (LD) mapping in plants detects and locates quantitative trait loci
(QTL) by the strength of the correlation between a trait and a marker. It offers greater …

The extent of linkage disequilibrium in Arabidopsis thaliana

M Nordborg, JO Borevitz, J Bergelson, CC Berry… - Nature …, 2002 - nature.com
Linkage disequilibrium (LD), the nonrandom occurrence of alleles in haplotypes, has long
been of interest to population geneticists. Recently, the rapidly increasing availability of …

Association mapping in plant genomes

BJ Soto-Cerda, S Cloutier - Genetic diversity in plants, 2012 - books.google.com
One of the many goals of plant geneticists and breeders pertains to the explanation of
phenotypic variation as it relates to changes in DNA sequence (Myles et al., 2009). The …

An introduction to association mapping in plants.

B Stich, AE Melchinger - CABI Reviews, 2010 - cabidigitallibrary.org
Most traits that are related to fitness and agricultural value of plants are quantitatively
inherited. Currently, there is tremendous interest in using association mapping approaches …

Applications of linkage disequilibrium and association mapping in crop plants

ES Ersoz, J Yu, ES Buckler - Genomics-Assisted Crop Improvement: Vol. 1 …, 2007 - Springer
The investigations of patterns of linkage disequilibrium for designing associationmapping
studies are fast becoming a method of interest for complex trait dissection and improvement …

Association mapping: critical considerations shift from genotyping to experimental design

S Myles, J Peiffer, PJ Brown, ES Ersoz, Z Zhang… - The Plant …, 2009 - academic.oup.com
The goal of many plant scientists' research is to explain natural phenotypic variation in terms
of simple changes in DNA sequence. Traditionally, linkage mapping has been the most …

Using association mapping to dissect the genetic basis of complex traits in plants

D Hall, C Tegström… - Briefings in functional …, 2010 - academic.oup.com
Association or linkage disequilibrium mapping has become a very popular method for
dissecting the genetic basis of complex traits in plants. The benefits of association mapping …