A global survey of alternative splicing in allopolyploid cotton: landscape, complexity and regulation
Alternative splicing (AS) is a crucial regulatory mechanism in eukaryotes, which acts by
greatly increasing transcriptome diversity. The extent and complexity of AS has been …
greatly increasing transcriptome diversity. The extent and complexity of AS has been …
Changes in alternative splicing in response to domestication and polyploidization in wheat
K Yu, M Feng, G Yang, L Sun, Z Qin, J Cao… - Plant …, 2020 - academic.oup.com
Alternative splicing (AS) occurs extensively in eukaryotes as an important mechanism for
regulating transcriptome complexity and proteome diversity, but variation in the AS …
regulating transcriptome complexity and proteome diversity, but variation in the AS …
A high quality Arabidopsis transcriptome for accurate transcript-level analysis of alternative splicing
R Zhang, CPG Calixto, Y Marquez… - Nucleic acids …, 2017 - academic.oup.com
Alternative splicing generates multiple transcript and protein isoforms from the same gene
and thus is important in gene expression regulation. To date, RNA-sequencing (RNA-seq) is …
and thus is important in gene expression regulation. To date, RNA-sequencing (RNA-seq) is …
Transcriptome survey reveals increased complexity of the alternative splicing landscape in Arabidopsis
Alternative splicing (AS) is a key regulatory mechanism that contributes to transcriptome and
proteome diversity. As very few genome-wide studies analyzing AS in plants are available …
proteome diversity. As very few genome-wide studies analyzing AS in plants are available …
The developing xylem transcriptome and genome-wide analysis of alternative splicing in Populus trichocarpa(black cottonwood) populations
Background Alternative splicing (AS) of genes is an efficient means of generating variation
in protein structure and function. AS variation has been observed between tissues, cell …
in protein structure and function. AS variation has been observed between tissues, cell …
Genome-wide mapping of alternative splicing in Arabidopsis thaliana
Alternative splicing can enhance transcriptome plasticity and proteome diversity. In plants,
alternative splicing can be manifested at different developmental stages, and is frequently …
alternative splicing can be manifested at different developmental stages, and is frequently …
Alternative splicing landscapes in Arabidopsis thaliana across tissues and stress conditions highlight major functional differences with animals
Background Alternative splicing (AS) is a widespread regulatory mechanism in multicellular
organisms. Numerous transcriptomic and single-gene studies in plants have investigated AS …
organisms. Numerous transcriptomic and single-gene studies in plants have investigated AS …
Genome-wide analyses of alternative splicing in plants: opportunities and challenges
WB Barbazuk, Y Fu, KM McGinnis - Genome research, 2008 - genome.cshlp.org
Alternative splicing (AS) creates multiple mRNA transcripts from a single gene. While AS is
known to contribute to gene regulation and proteome diversity in animals, the study of its …
known to contribute to gene regulation and proteome diversity in animals, the study of its …
Genome-wide identification of evolutionarily conserved alternative splicing events in flowering plants
Alternative splicing (AS) plays important roles in many plant functions, but its conservation
across the plant kingdom is not known. We describe a methodology to identify AS events …
across the plant kingdom is not known. We describe a methodology to identify AS events …
Genome-Wide Analysis of Alternative Splicing in Zea mays: Landscape and Genetic Regulation
SR Thatcher, W Zhou, A Leonard, BB Wang… - The Plant …, 2014 - academic.oup.com
Alternative splicing enhances transcriptome diversity in all eukaryotes and plays a role in
plant tissue identity and stress adaptation. To catalog new maize (Zea mays) transcripts and …
plant tissue identity and stress adaptation. To catalog new maize (Zea mays) transcripts and …