Recent advances in structure‐based enzyme engineering for functional reconstruction
SY Xu, L Zhou, Y Xu, HY Hong, C Dai… - Biotechnology and …, 2023 - Wiley Online Library
Structural information can help engineer enzymes. Usually, specific amino acids in particular
regions are targeted for functional reconstruction to enhance the catalytic performance …
regions are targeted for functional reconstruction to enhance the catalytic performance …
Role of distal sites in enzyme engineering
J Gu, Y Xu, Y Nie - Biotechnology Advances, 2023 - Elsevier
The limitations associated with natural enzyme catalysis have triggered the rise of the field of
protein engineering. Traditional rational design was based on the analysis of protein …
protein engineering. Traditional rational design was based on the analysis of protein …
Tailoring new enzyme functions by rational redesign
F Cedrone, A Ménez, E Quéméneur - Current opinion in structural biology, 2000 - Elsevier
Site-directed mutagenesis is still a very efficient strategy to elaborate improved enzymes.
Recently, advances have been made in developing rational strategies aimed at reshaping …
Recently, advances have been made in developing rational strategies aimed at reshaping …
Protein engineering by efficient sequence space exploration through combination of directed evolution and computational design methodologies
Directed evolution has matured in academia and industry as a versatile algorithm to
redesign enzymes to match demands in biotechnological applications (as documented by …
redesign enzymes to match demands in biotechnological applications (as documented by …
Building enzymes through design and evolution
EJ Hossack, FJ Hardy, AP Green - ACS Catalysis, 2023 - ACS Publications
Designing efficient enzymes is a formidable challenge at the forefront of modern
biocatalysis. Here, we review recent developments in the field and illustrate how the …
biocatalysis. Here, we review recent developments in the field and illustrate how the …
Structure-guided rational design of the substrate specificity and catalytic activity of an enzyme
JM Choi, HS Kim - Methods in Enzymology, 2020 - Elsevier
The quest for an enzyme with desired property is high for biocatalyic production of valuable
products in industrial biotechnology. Synthetic biology and metabolic engineering also …
products in industrial biotechnology. Synthetic biology and metabolic engineering also …
Motif‐directed redesign of enzyme specificity
B Borgo, JJ Havranek - Protein Science, 2014 - Wiley Online Library
Computational protein design relies on several approximations, including the use of fixed
backbones and rotamers, to reduce protein design to a computationally tractable problem …
backbones and rotamers, to reduce protein design to a computationally tractable problem …
Evolution of an enzyme conformational ensemble guides design of an efficient biocatalyst
A Broom, RV Rakotoharisoa, MC Thompson, N Zarifi… - bioRxiv, 2020 - biorxiv.org
The creation of artificial enzymes is a key objective of computational protein design.
Although de novo enzymes have been successfully designed, these exhibit low catalytic …
Although de novo enzymes have been successfully designed, these exhibit low catalytic …
The state-of-the-art strategies of protein engineering for enzyme stabilization
Q Liu, G Xun, Y Feng - Biotechnology advances, 2019 - Elsevier
Enzymes generated by natural recruitment and protein engineering have greatly contribute
in various sets of applications. However, their insufficient stability is a bottleneck that limit the …
in various sets of applications. However, their insufficient stability is a bottleneck that limit the …
De novo design of biocatalysts
The challenging field of de novo enzyme design is beginning to produce exciting results.
The application of powerful computational methods to functional protein design has recently …
The application of powerful computational methods to functional protein design has recently …