Chromosome‐scale genome assembly and insights into the metabolome and gene regulation of leaf color transition in an important oak species, Quercus dentata

WB Wang, XF He, XM Yan, B Ma, CF Lu, J Wu… - New …, 2023 - Wiley Online Library
Quercus dentata Thunb., a dominant forest tree species in northern China, has significant
ecological and ornamental value due to its adaptability and beautiful autumn coloration, with …

Transcriptomic analysis of leaf in tree peony reveals differentially expressed pigments genes

J Luo, Q Shi, L Niu, Y Zhang - Molecules, 2017 - mdpi.com
Tree peony (Paeonia suffruticosa Andrews) is an important traditional flower in China.
Besides its beautiful flower, the leaf of tree peony has also good ornamental value owing to …

The honeysuckle genome provides insight into the molecular mechanism of carotenoid metabolism underlying dynamic flower coloration

X Pu, Z Li, Y Tian, R Gao, L Hao, Y Hu, C He… - New …, 2020 - Wiley Online Library
Lonicera japonica is a widespread member of the Caprifoliaceae (honeysuckle) family
utilized in traditional medical practices. This twining vine honeysuckle also is a much‐sought …

A chromosome‐scale genome assembly of the Mongolian oak (Quercus mongolica)

W Ai, Y Liu, M Mei, X Zhang, E Tan… - Molecular Ecology …, 2022 - Wiley Online Library
Abstract Mongolian oak (Quercus mongolica Fisch.) is an ecologically and economically
important white oak species native to and widespread in the temperate zone of East Asia …

Chromosome-Level Genome Assembly for Acer pseudosieboldianum and Highlights to Mechanisms for Leaf Color and Shape Change

X Li, K Cai, Z Han, S Zhang, A Sun, Y Xie… - Frontiers in Plant …, 2022 - frontiersin.org
Acer pseudosieboldianum (Pax) Komarov is an ornamental plant with prominent potential
and is naturally distributed in Northeast China. Here, we obtained a chromosome-scale …

Transcriptome sequencing of a chimaera reveals coordinated expression of anthocyanin biosynthetic genes mediating yellow formation in herbaceous peony …

D Zhao, Y Jiang, C Ning, J Meng, S Lin, W Ding, J Tao - BMC genomics, 2014 - Springer
Abstract Background Herbaceous peony (Paeonia lactiflora Pall.) is a traditional flower in
China and a wedding attractive flower in worldwide. In its flower colour, yellow is the rarest …

Transcriptome analysis based on a combination of sequencing platforms provides insights into leaf pigmentation in Acer rubrum

Z Chen, X Lu, Y Xuan, F Tang, J Wang, D Shi, S Fu… - BMC plant biology, 2019 - Springer
Abstract Background Red maple (Acer rubrum L.) is one of the most common and
widespread trees with colorful leaves. We found a mutant with red, yellow, and green leaf …

Evolutionary insights from de novo transcriptome assembly and SNP discovery in California white oaks

SJ Cokus, PF Gugger, VL Sork - BMC genomics, 2015 - Springer
Background Reference transcriptomes provide valuable resources for understanding
evolution within and among species. We de novo assembled and annotated a reference …

PPGR: a comprehensive perennial plant genomes and regulation database

S Yang, W Zong, L Shi, R Li, Z Ma, S Ma… - Nucleic Acids …, 2024 - academic.oup.com
Perennial woody plants hold vital ecological significance, distinguished by their unique
traits. While significant progress has been made in their genomic and functional studies, a …

Hardwood tree genomics: unlocking woody plant biology

GA Tuskan, AT Groover, J Schmutz… - Frontiers in plant …, 2018 - frontiersin.org
Woody perennial angiosperms (ie, hardwood trees) are polyphyletic in origin and occur in
most angiosperm orders. Despite their independent origins, hardwoods have shared …