Building connectomes using diffusion MRI: why, how and but

SN Sotiropoulos, A Zalesky - NMR in Biomedicine, 2019 - Wiley Online Library
Why has diffusion MRI become a principal modality for mapping connectomes in vivo? How
do different image acquisition parameters, fiber tracking algorithms and other …

[HTML][HTML] Using diffusion MRI data acquired with ultra-high gradient strength to improve tractography in routine-quality data

C Maffei, C Lee, M Planich, M Ramprasad, N Ravi… - Neuroimage, 2021 - Elsevier
The development of scanners with ultra-high gradient strength, spearheaded by the Human
Connectome Project, has led to dramatic improvements in the spatial, angular, and diffusion …

Mapping connectomes with diffusion MRI: deterministic or probabilistic tractography?

T Sarwar, K Ramamohanarao… - Magnetic resonance in …, 2019 - Wiley Online Library
Purpose Human connectomics necessitates high‐throughput, whole‐brain reconstruction of
multiple white matter fiber bundles. Scaling up tractography to meet these high‐throughput …

Mapping the human connectome using diffusion MRI at 300 mT/m gradient strength: Methodological advances and scientific impact

Q Fan, C Eichner, M Afzali, L Mueller, CMW Tax… - Neuroimage, 2022 - Elsevier
Tremendous efforts have been made in the last decade to advance cutting-edge MRI
technology in pursuit of mapping structural connectivity in the living human brain with …

[HTML][HTML] The connectome viewer toolkit: an open source framework to manage, analyze, and visualize connectomes

S Gerhard, A Daducci, A Lemkaddem… - Frontiers in …, 2011 - frontiersin.org
Advanced neuroinformatics tools are required for methods of connectome mapping,
analysis, and visualization. The inherent multi-modality of connectome datasets poses new …

The connectome mapper: an open-source processing pipeline to map connectomes with MRI

A Daducci, S Gerhard, A Griffa, A Lemkaddem… - PloS one, 2012 - journals.plos.org
Researchers working in the field of global connectivity analysis using diffusion magnetic
resonance imaging (MRI) can count on a wide selection of software packages for processing …

[HTML][HTML] Quantitative mapping of the brain's structural connectivity using diffusion MRI tractography: A review

F Zhang, A Daducci, Y He, S Schiavi, C Seguin… - Neuroimage, 2022 - Elsevier
Diffusion magnetic resonance imaging (dMRI) tractography is an advanced imaging
technique that enables in vivo reconstruction of the brain's white matter connections at …

Correction for diffusion MRI fibre tracking biases: The consequences for structural connectomic metrics

CH Yeh, RE Smith, X Liang, F Calamante, A Connelly - Neuroimage, 2016 - Elsevier
Diffusion MRI streamlines tractography has become a major technique for inferring structural
networks through reconstruction of brain connectome. However, quantification of structural …

Connectome imaging for mapping human brain pathways

Y Shi, AW Toga - Molecular psychiatry, 2017 - nature.com
With the fast advance of connectome imaging techniques, we have the opportunity of
mapping the human brain pathways in vivo at unprecedented resolution. In this article we …

Human cortical connectome reconstruction from diffusion weighted MRI: the effect of tractography algorithm

M Bastiani, NJ Shah, R Goebel, A Roebroeck - Neuroimage, 2012 - Elsevier
Reconstructing the macroscopic human cortical connectome by Diffusion Weighted Imaging
(DWI) is a challenging research topic that has recently gained a lot of attention. In the …