Outstanding Properties of the Hydration Shell around β-d-Glucose: A Computational Study

I Bakó, L Pusztai, S Pothoczki - ACS omega, 2024 - ACS Publications
Ab initio molecular dynamics (AIMD) simulations have been performed on aqueous
solutions of four simple sugars, α-d-glucose, β-d-glucose, α-d-mannose, and α-d-galactose …

Why some simple sugars are much better soluble in water than others?

I Bakó, L Pusztai, S Pothoczki - arXiv preprint arXiv:2308.03653, 2023 - arxiv.org
Ab initio molecular dynamics (AIMD) simulations have been performed on aqueous
solutions of four simple sugars,{\alpha}-D-glucose,\b {eta}-D-glucose,{\alpha}-D-mannose …

Preferred conformation of the glycosidic linkage of methyl-β-mannose

O Coskuner - The Journal of chemical physics, 2007 - pubs.aip.org
The conformational preference of the glycosidic linkage of methyl-β-mannose was studied in
the gas phase and in aqueous solution by ab initio calculations, and by molecular dynamics …

Quantum chemistry meets deep learning for complex carbohydrate and glycopeptide species I

MG Habiboglu, O Coskuner-Weber - Zeitschrift für Physikalische …, 2019 - degruyter.com
Carbohydrate complexes are crucial in many various biological and medicinal processes.
The impacts of N-acetyl on the glycosidic linkage flexibility of methyl β-D-glucopyranose …

A theoretical study on hydration of alanine zwitterions

K Sagarik, S Dokmaisrijan - Journal of Molecular Structure: THEOCHEM, 2005 - Elsevier
Structures and energetic of hydrogen bond (H-bond) networks of water at the charged
functional groups of two forms of alanine zwitterions were studied using various theoretical …

The hydration of glucose: the local configurations in sugar–water hydrogen bonds

T Suzuki - Physical Chemistry Chemical Physics, 2008 - pubs.rsc.org
The hydration of a simple sugar is an essential model for understanding interactions
between hydrophilic groups and interfacial water molecules. Here I perform first-principles …

Effects of temperature, concentration, and isomer on the hydration structure in monosaccharide solutions

K Tomobe, E Yamamoto, M Yasui… - Physical Chemistry …, 2017 - pubs.rsc.org
Water–monosaccharide coupled interactions are essential for the function, stability, and
dynamics of all glycans. Using molecular dynamics simulations, we investigated the effects …

Ab initio investigation of the first hydration shell of glucose

R Song, D Chen, C Suo, Z Guo - Carbohydrate research, 2020 - Elsevier
The interaction between sugars and water molecules plays a crucial role in exploring the
complex metabolic reactions of living systems. The fully random conformational search is …

Circular hydrogen bond networks on the surface of β-ribofuranose in aqueous solution

T Suzuki, T Sota - The Journal of Physical Chemistry B, 2005 - ACS Publications
This paper examines the hydration structure on the surface of β-ribofuranose in aqueous
solution, using the ab initio molecular dynamics method. In particular, we focus on circular …

Investigating the Aqueous Behavior Of D-Glucose, D-Fructose And D-Allulose by Molecular Dynamics (MD) Simulations And Nuclear Magnetic Resonance (NMR) …

ZY Balabanlı - 2022 - open.metu.edu.tr
D-Glucose, D-Fructose and D-Allulose are isomeric monosaccharides, specifically D-
allulose and D-fructose are carbon-3 epimers of each other. Although they are very similar in …