Embracing the unknown: disentangling the complexities of the soil microbiome

N Fierer - Nature Reviews Microbiology, 2017 - nature.com
Soil microorganisms are clearly a key component of both natural and managed ecosystems.
Despite the challenges of surviving in soil, a gram of soil can contain thousands of individual …

Role of environmental factors in shaping the soil microbiome

W Islam, A Noman, H Naveed, Z Huang… - … Science and Pollution …, 2020 - Springer
The soil microbiome comprises one of the most important and complex components of all
terrestrial ecosystems as it harbors millions of microbes including bacteria, fungi, archaea …

[HTML][HTML] Life in earth–the root microbiome to the rescue?

TH Mauchline, JG Malone - Current opinion in microbiology, 2017 - Elsevier
Highlights•The soil microbiome has great potential for crop growth promotion and
biocontrol.•Next generation sequencing has facilitated novel research into the soil …

More than the sum of its parts: microbiome biodiversity as a driver of plant growth and soil health

M Saleem, J Hu, A Jousset - Annual review of ecology, evolution …, 2019 - annualreviews.org
Microorganisms drive several processes needed for robust plant growth and health.
Harnessing microbial functions is thus key to productive and sustainable food production …

[HTML][HTML] Back to the future of soil metagenomics

J Nesme, W Achouak, SN Agathos, M Bailey… - Frontiers in …, 2016 - frontiersin.org
Direct extraction and characterization of microbial community DNA through PCR amplicon
surveys and metagenomics has revolutionized the study of environmental microbiology and …

Trophic regulations of the soil microbiome

MP Thakur, S Geisen - Trends in microbiology, 2019 - cell.com
The soil microbiome regulates vital ecosystem functions ranging from primary production to
soil carbon sequestration. Yet, we have only begun to understand the factors regulating the …

Microbial diversity and function in soil: from genes to ecosystems

V Torsvik, L Øvreås - Current opinion in microbiology, 2002 - Elsevier
Soils sustain an immense diversity of microbes, which, to a large extent, remains
unexplored. A range of novel methods, most of which are based on rRNA and rDNA …

The interplay between microbial communities and soil properties

L Philippot, C Chenu, A Kappler, MC Rillig… - Nature Reviews …, 2024 - nature.com
In recent years, there has been considerable progress in determining the soil properties that
influence the structure of the soil microbiome. By contrast, the effects of microorganisms on …

Soil microbial biogeography in a changing world: recent advances and future perspectives

H Chu, GF Gao, Y Ma, K Fan, M Delgado-Baquerizo - Msystems, 2020 - Am Soc Microbiol
Soil microbial communities are fundamental to maintaining key soil processes associated
with litter decomposition, nutrient cycling, and plant productivity and are thus integral to …

[HTML][HTML] Unboxing the black box—one step forward to understand the soil microbiome: a systematic review

A Mishra, L Singh, D Singh - Microbial ecology, 2023 - Springer
Soil is one of the most important assets of the planet Earth, responsible for maintaining the
biodiversity and managing the ecosystem services for both managed and natural …