A national pilot study: Clinical long-read sequencing of chromosomal rearrangements
J Eisfeldt, A Ameur, F Lenner, E ten Berk de Boer, M Ek… - 2023 - europepmc.org
Background: Clinical genetic laboratories often require comprehensive analysis of
chromosomal rearrangements/structural variants (SVs) which can range from gross …
chromosomal rearrangements/structural variants (SVs) which can range from gross …
Towards routine long-read sequencing for rare disease: a national pilot study on chromosomal rearrangements
J Eisfeldt, A Ameur, F Lenner, ET Berk de Boer, M Ek… - medRxiv, 2023 - medrxiv.org
Background Clinical genetic laboratories often require comprehensive analysis of
chromosomal rearrangements/structural variants (SVs) which can range from gross …
chromosomal rearrangements/structural variants (SVs) which can range from gross …
Linked-Read sequencing resolves complex structural variants
Large genomic structural variants (> 50bp) are important contributors to disease, yet they
remain one of the most difficult types of variation to accurately ascertain, in part because …
remain one of the most difficult types of variation to accurately ascertain, in part because …
Exploiting emerging DNA sequencing technologies to study genomic rearrangements
S Meiers - 2018 - archiv.ub.uni-heidelberg.de
Structural variants (SVs) alter the structure of chromosomes by deleting, duplicating or
otherwise rearranging pieces of DNA. They contribute the majority of nucleotide differences …
otherwise rearranging pieces of DNA. They contribute the majority of nucleotide differences …
Next-generation sequencing strategies enable routine detection of balanced chromosome rearrangements for clinical diagnostics and genetic research
The contribution of balanced chromosomal rearrangements to complex disorders remains
unclear because they are not detected routinely by genome-wide microarrays and clinical …
unclear because they are not detected routinely by genome-wide microarrays and clinical …
marching toward 100% whole genome sequencing
YH Shiao - Frontiers in Genetics, 2016 - frontiersin.org
Genomes are becoming recognized as dynamic molecules which modify their structures,
mediated through epigenetic mechanisms, in response to intrinsic and extrinsic stimulants …
mediated through epigenetic mechanisms, in response to intrinsic and extrinsic stimulants …
[HTML][HTML] Complex genomic rearrangements: an underestimated cause of rare diseases
J Schuy, CM Grochowski, CMB Carvalho… - Trends in Genetics, 2022 - cell.com
Complex genomic rearrangements (CGRs) are known contributors to disease but are often
missed during routine genetic screening. Identifying CGRs requires (i) identifying copy …
missed during routine genetic screening. Identifying CGRs requires (i) identifying copy …
Genomic disorders in the genomics era
CJZ Mendoza, C Gonzaga-Jauregui - Genomics of Rare Diseases, 2021 - Elsevier
From karyotyping to sequencing, the development and improvement of technologies that
allow to study the human genome at greater resolution have revealed the extent to which it …
allow to study the human genome at greater resolution have revealed the extent to which it …
A collection of read depth profiles at structural variant breakpoints
I Bezdvornykh, N Cherkasov, A Kanapin, A Samsonova - Scientific Data, 2023 - nature.com
SWaveform, a newly created open genome-wide resource for read depth signal in the
vicinity of structural variant (SV) breakpoints, aims to boost development of computational …
vicinity of structural variant (SV) breakpoints, aims to boost development of computational …
Detection and visualization of complex structural variants from long reads
Background With applications in cancer, drug metabolism, and disease etiology,
understanding structural variation in the human genome is critical in advancing the thrusts of …
understanding structural variation in the human genome is critical in advancing the thrusts of …