Optimising genomic selection in wheat: effect of marker density, population size and population structure on prediction accuracy

A Norman, J Taylor, J Edwards… - G3: Genes, Genomes …, 2018 - academic.oup.com
Genomic selection applied to plant breeding enables earlier estimates of a line's
performance and significant reductions in generation interval. Several factors affecting …

[HTML][HTML] The effects of training population design on genomic prediction accuracy in wheat

SMK Edwards, JB Buntjer, R Jackson… - Theoretical and Applied …, 2019 - Springer
Genomic selection offers several routes for increasing the genetic gain or efficiency of plant
breeding programmes. In various species of livestock, there is empirical evidence of …

Genomic selection in a commercial winter wheat population

S He, AW Schulthess, V Mirdita, Y Zhao… - Theoretical and Applied …, 2016 - Springer
Key message Genomic selection models can be trained using historical data and filtering
genotypes based on phenotyping intensity and reliability criterion are able to increase the …

Genomic selection accuracy for grain quality traits in biparental wheat populations

EL Heffner, JL Jannink, H Iwata, E Souza… - Crop …, 2011 - Wiley Online Library
Genomic selection (GS) is a promising tool for plant and animal breeding that uses genome‐
wide molecular marker data to capture small and large effect quantitative trait loci and …

Genomic selection in preliminary yield trials in a winter wheat breeding program

V Belamkar, MJ Guttieri, W Hussain… - G3: Genes …, 2018 - academic.oup.com
Genomic prediction (GP) is now routinely performed in crop plants to predict unobserved
phenotypes. The use of predicted phenotypes to make selections is an active area of …

Assessing genomic selection prediction accuracy in a dynamic barley breeding population

AH Sallam, JB Endelman, JL Jannink… - The Plant …, 2015 - Wiley Online Library
Prediction accuracy of genomic selection (GS) has been previously evaluated through
simulation and cross‐validation; however, validation based on progeny performance in a …

Prospects and challenges of applied genomic selection—a new paradigm in breeding for grain yield in bread wheat

P Juliana, RP Singh, J Poland, S Mondal… - The plant …, 2018 - Wiley Online Library
Genomic selection (GS) has been promising for increasing genetic gains in several species.
Therefore, we evaluated the potential integration of GS for grain yield (GY) in bread wheat …

[HTML][HTML] Genomic assisted selection for enhancing line breeding: merging genomic and phenotypic selection in winter wheat breeding programs with preliminary yield …

S Michel, C Ametz, H Gungor, B Akgöl, D Epure… - Theoretical and Applied …, 2017 - Springer
Key message Early generation genomic selection is superior to conventional phenotypic
selection in line breeding and can be strongly improved by including additional information …

[HTML][HTML] Genomic selection—considerations for successful implementation in wheat breeding programs

DL Larkin, DN Lozada, RE Mason - Agronomy, 2019 - mdpi.com
In order to meet the goal of doubling wheat yield by 2050, breeders must work to improve
breeding program efficiency while also implementing new and improved technologies in …

[HTML][HTML] Optimizing training population size and genotyping strategy for genomic prediction using association study results and pedigree information. A case of study …

F Cericola, A Jahoor, J Orabi, JR Andersen, LL Janss… - PloS one, 2017 - journals.plos.org
Wheat breeding programs generate a large amount of variation which cannot be completely
explored because of limited phenotyping throughput. Genomic prediction (GP) has been …